Scleropages formosus (Asian bonytongue): 108936248
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Entry
108936248 CDS
T04919
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm00780
Biotin metabolism
sfm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
108936248 (hlcs)
Enzymes [BR:
sfm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
108936248 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
108936248 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
108936248 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
108936248 (hlcs)
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_N
Motif
Other DBs
NCBI-GeneID:
108936248
NCBI-ProteinID:
XP_018611036
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All DBs
Position
4:17125335..17161942
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AA seq
924 aa
AA seq
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MLITLCYVYLWVRFQKCYTLVIRSAVRRLCGSRVGFAFCTVKPGAPHGGHDTPVHRLNSA
RRPISEQPEDTVLLKRGNKVVYVTEPQACDFSKWTVPLGSSLLATPKTENSENIAFLIEA
TSEQGVAIKHYTSSNNKTLRWSDYCLPLALSPGQPFRAVAEASIDNFSHLGVAFMEDRLH
LDNGLIPEKIVSVLLRESAFEELVENQKLDLNKQKDLLLNSATEETPLSQHIPYERRKVP
EVGETNGAEQACDELQIAPELEIQESNPGDQEVSEKSGAVTDHHTEDYHMEGRHLHLSSC
HECLELENSTILSVKFASAEDIPDLPDDYESGRDGVEEEWGEEESFVLRTKRANPGGKPP
NVLVYTGGCERRFDRVHALLAECVDTDSYTVYHLRPPKALSEPWLNSALLLVLASDEPLA
PQLCDRILAYLRLGGKMLSLCSSFCPAGLELAPRDAQQGRICRVSFTKANATELELHALA
SSHVFVQQEGGQAEYEGQVERWGELHGDSRDMVIVRVTHGKDGGEAVLCQVQLDVAPDSQ
DIQSLQDFEKLKVSNALRYEVLTEILSSLGLRCELSQVPPLSPVYLLSASQESQDTFLQW
LRMQVDGEGVLRSSKLSLKAVSCAEAQAPLPEGTLALVTDPPEVLSEQFSLQTYSLHLHS
RVLGRSLLFAETTSTTMDLLEGLMLRLPGEVGLIAIAARQTKGRGRGGNAWLSPSGCAMF
TAHVRVEISSHLGQRIAFLQHLAALAVVEAVRTLPGYEDIDLRVKWPNDIYYSNVMKLGG
VLVNSTVMGSTFHLLVGCGFNVDNSNPTICINDLVAQHNRQWGSTLELFSTSQLIARSIS
KLEKLIDTFQDMGPHGVLPLYYKRWVHSGTQVRLWSEDGPLADVVGLDEHGFLQVRSGEQ
GVVSVQPDGNSFDMLKNLVVTKQH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgctaataacgctgtgctacgtctacttgtgggtacgcttccagaagtgttacacgctg
gtgattcgcagcgccgtgcggaggctctgcggcagccgggtcggcttcgcgttttgcaca
gtgaagccgggggcgcctcacgggggacatgatacacccgtccacaggctgaacagcgcc
aggcgacccatctccgagcagccagaagacacagtgctcctgaaacgggggaacaaagtg
gtgtacgtaacggagccgcaggcttgtgacttcagcaagtggactgtgccattgggctcc
tctctgctggcgactccaaagactgaaaacagcgaaaatattgctttcctcatagaggca
acttcagagcaaggagttgccataaagcattatacctcatcaaacaataaaacgctgagg
tggtcagattactgcctgcccctggccctcagtcctggacagccattccgggccgtggca
gaggccagtattgacaatttcagccacctgggagtggccttcatggaagaccggctgcac
ttggacaacgggcttattccagaaaaaatcgtttctgtcctgctcagggaatctgcattt
gaagaacttgttgagaatcaaaagttggacttgaataagcagaaagacctcctcttgaat
agcgctacagaagaaaccccactgtcacagcacataccatatgagaggaggaaagtgcca
gaggtaggagaaacgaacggcgcagagcaggcatgtgatgagctacaaattgcccctgag
ctggagatacaagagagtaaccctggggaccaagaagtctcagagaaatctggagcagtc
acggaccaccacacagaagactaccacatggagggtcgtcatctacacctctccagctgc
catgagtgtctggagctggagaacagcaccatcctctcagtgaagtttgcctcagcagag
gacatccccgaccttccagatgactacgaatctgggagggatggggttgaggaggagtgg
ggagaagaggagagctttgtgcttcggaccaagagggccaaccctggtggcaagcccccc
aatgtgctggtgtacacgggaggctgcgagcggcggtttgatcgcgtgcatgctcttctg
gctgagtgtgttgacacggacagctacaccgtgtaccatctgcggcccccgaaagccctc
agtgagccctggctgaacagtgccttgctcttggtgctggcgtctgatgagcctctggcc
cctcagctctgtgatcgaatcctcgcctacctgcggcttggcggaaagatgttgagcctt
tgctcctccttctgccctgcaggtctggagctggcaccccgggatgcccagcagggccgc
atttgcagggttagctttaccaaggccaatgctaccgaacttgagcttcatgctctggcc
agcagccatgtattcgtgcagcaggagggtgggcaggcggagtacgaaggccaagtggag
cgatggggagagctgcatggggacagcagggacatggtcattgtcagggtgacacatggc
aaagatggcggggaggctgtgctgtgtcaggtgcagttggatgtggctccagactcccag
gatattcagagtctgcaggattttgaaaagctcaaagtgagcaatgcgctgcgctatgaa
gtgctgacagagatcctgagctccctgggactaaggtgtgagctgagccaggtgccccca
ctcagcccagtatacctcctctctgcttcacaggagtcccaggacaccttcctgcaatgg
ctaaggatgcaggtggacggggagggcgtgctgaggtccagcaaactctcgctgaaagcg
gtttcatgtgcggaggcccaggcgccattaccggagggcacgctggccctggtcaccgat
cccccagaggtcctctcggagcagttcagtctgcagacctacagcctgcacctgcacagc
cgagtcctgggccgcagcctgctgttcgccgagaccacgtccaccaccatggacctgctg
gaagggttgatgctccgcttacctggggaagtggggttaatagctatcgctgctcgacag
accaagggcagaggtcgcgggggcaacgcttggctgagcccatcaggctgcgccatgttc
acagcacacgtgcgcgtggaaatcagctcacacctgggccagaggatcgccttcctgcaa
cacctggctgctctcgcggtcgtggaggccgtgcgcaccctgcctggctacgaggacata
gacctgagggtgaagtggccaaatgacatttactacagtaatgtgatgaaattgggtgga
gtgctggttaattccacagtaatggggtcgacgttccacctgcttgtgggctgcgggttc
aacgtggacaacagcaaccccaccatctgcatcaatgacttagtggcccagcacaaccgg
cagtgggggtccacgctggagctcttcagcacatcccagctgattgcccgcagcatctct
aagctggagaagctcatcgacaccttccaggacatggggccccacggagtcttgcccctc
tactataagagatgggtgcacagcggcacgcaggttcgcctttggagcgaggatgggccg
ctggctgatgtggtggggctagacgaacacggctttctgcaagtgcgttccggcgagcaa
ggtgtggtctccgtgcagcctgatggcaactccttcgacatgctgaagaaccttgtggtc
accaagcaacactga
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