Scleropages formosus (Asian bonytongue): 108938618
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Entry
108938618 CDS
T04919
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04020
Calcium signaling pathway
sfm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108938618
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108938618
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108938618
Ion channels [BR:
sfm04040
]
Ligand-gated channels
Glutamate (ionotropic)
108938618
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
108938618
NCBI-ProteinID:
XP_018614888
UniProt:
A0A8C9VL03
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Position
17:complement(8565251..8595976)
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AA seq
900 aa
AA seq
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MRLCLLAVFLCCSCARGGCEPKVVNIGAVLSQKRYEQVFKDAVTQANHLYGKDKFKLNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKNRNYENLDQLSYDNKRGPKAEKVLLFNQDTNLTALLKEARELEARVIILSA
SEEDAAAVYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKFPEGLTGRVEFNDD
GDRKFAHYSILNYQKSRLVQVGVFNGTQVVLNTQRKIIWPGGETEKPRGYQMSTRLKIVT
IHQEPFVYVKPTLPDGTCKEEYTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVGDGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPSVSTVV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctgtctgctggcggtgtttctgtgctgctcctgcgcacggggcggttgtgag
cccaaggtagtgaacatcggcgccgtcctgagtcagaagaggtacgagcaggtgttcaag
gacgcggtcactcaagccaaccacctctacgggaaagataagttcaagctgaacgccatc
tctgtcacccacaaacccaacgccatccagatggctctgtcggtctgcgaagacctcatc
tccaaccaggtgtacgcaatcctcgtaagtcacccgccccagtccaacgaccacctgact
cccacacccgtgtcctacacagctgggttttaccgcattcccgtggtggggctcacaact
cgcatgtccatctactcagacaagagtatccacctgtccttcttgcgaacagtgccaccc
tactcccaccaagcacacgtgtggtttgacttgatgcgtgagtttcgatggaaccatatc
atcttgattgtgagtgatgaccacgagggccgtgctgcgcagaagaggctggagacactg
ctggaggagagggagaccaagaataaaaacaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggcagagaaagtcctactcttcaaccaagatacgaat
cttacggcattgctaaaggaggccagggagctggaggcccgtgtcatcatcctctctgca
agcgaggaggatgcagctgcagtgtacaaggctgcacggcagctcaacatgactggttct
ggttatgtgtggctggttggagagagggagatgtcagggaaggccctgagtgaagctcca
gatggactgattggcctccagctgatcaatggcaagaacgagtcagcacatatcaacgat
gcagttgctgttgtggcgcagtccatccaggagctcttcgagaaagagaatatcacagag
ccaccacgaggctgtgtgggcaacaccaatatttggaagacggggcctcttttcaagcgg
gtactgatgtcttccaagtttcctgagggtctcacaggtcgtgtggaattcaatgatgat
ggggacaggaagtttgcacactacagcattctgaactaccagaagagcagacttgttcaa
gttggagttttcaatggcacccaggttgtattaaacactcaaagaaagatcatctggcct
ggaggagagacagaaaagcccagaggctatcagatgtccacacgactgaagattgtcacc
attcatcaggagccctttgtgtatgttaaacccactttaccagatggtacctgcaaagaa
gaatatactgtcaatggggtcttgatcaagaaagtgatctgcacaggccccaatgaaacc
atcccaggacgcccaattgtaccacagtgttgctatggcttctgcattgacttgctaatc
aagctggctatgaccatgaacttcacgtatgaggtgcatttagtgggtgatgggaaattt
gggacacaagagcgggtgaacaacagcaacaagaaagagtggaatggcatgatgggagag
ctacttgggggtctggcggatatgattgtggcaccactcactataaacaatgagcgagcc
caatacatagagttctccaagccattcaaataccaagggctcaccatccttgtgaagaag
gaaatcccccggagcacactggactcattcatgcagcctttccagagcactctgtggctc
ctggtgggactttcagtgcacgtggtagcagtgatgctctacctgctggatcggttcagc
ccttttggaaggttcaaagtgaatagtgaagaagaagaagaagatgccctcaccttatct
tcagcaatgtggttctcctggggagtacttctgaactctggaattggggagggtgcacca
cgcagcttctcggcaaggatcttggggatggtgtgggctggttttgccatgatcattgtg
gcatcttacactgccaacctggctgctttcctggtcttggaccgacctgaagagcgcatt
actgggatcaatgacccacggttgcggaacccatcagacaagttcatctatgccacagtg
aagcagagctcagttgacatctacttccggcggcaggtggaactgagcaccatgtaccgt
cacatggagaagcacaactatgagagtgcggctgaggccatccaggccgtgcgtgacaac
aagctccatgctttcatctgggactcggcagtactggagtttgaagcctcacagaagtgt
gacctggtgacaacaggagagcttttcttccgctcaggttttggcataggcatgcggaag
gatagcccctggaagcagaatgtgtccctggctattctcagctcccatgaaaatggcttc
atggaggatctcgataaaacttgggtgaggtaccaggagtgtgactcaaggagcaatgcc
cctgccacactcacctttgagaatatggcaggtgtatttatgctggttgctgggggcata
gtggcaggtatcttcctcatcttcattgaaattgcttacaaacgtcacaaagatgcccgc
aggaagcagatgcaactggccttcgcagcagtcaatgtgtggaggaagaacctgcagcca
tatccaacagacatcacaggacagctgaacctctcggacccgtccgtcagtactgtggtg
tga
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