Scleropages formosus (Asian bonytongue): 108939747
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Entry
108939747 CDS
T04919
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03020
RNA polymerase
sfm04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108939747 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
108939747 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108939747 (polr3a)
Enzymes [BR:
sfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108939747 (polr3a)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
108939747 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
108939747
NCBI-ProteinID:
XP_018616853
UniProt:
A0A8C9RWV6
LinkDB
All DBs
Position
24:complement(19702455..19721979)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLPYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSHIMLSKE
EKQQFLDYLKRPGLTYLQKRGLKKKISDKCRKRTVCLNCSAFNGPVKKCGLLKIIHEKYK
TNKKVVDTLVSEFLQSFDTAIEHNKEVESLLNRAQENLNPLLVLNLFKRIPSEDVPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIELMRKLVRNGPDLHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKVCQIVASILVGKDEKVKIALPPPAILKPIRLWTGKQV
FSLILKPSKLCPVKANLRTKGKQYCGRGEDLCPNDSFVVIQNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDAG
YKKCDEYIEALKTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLTELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIVQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNVRAVYTCPEQPALSKNELELTAESIMKRNDFLC
CRDSFLEEIRKFIKTISEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIISAHLDIEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKEELPKIV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVNGSRTSSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDASYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHRADKDPAPPKRPLLFD
NGEFHISLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagagcagttcagagagacagatgtggctaaaaagataagccacatctgcttt
ggaatgaagtctgctgaacagatgcgacagcaggctcacatccaggtggtgagcaagaat
ctgtacagccaggatacgagtcacacgcctctgccttatggagtcctggaccaccgcatg
ggcacgagtgagaaagatcgaccgtgtgaaacctgcggcaagaacctggcggactgcctc
gggcattatggctaccttgacctggaactgccgtgtttccacgtgggctattttaaggcc
atcatcggcatattgcagatgatctgcaaaacctgttcgcacatcatgctctcgaaagag
gaaaagcagcagtttttggattatctgaagaggcctggtttaacgtatctgcagaagcga
ggcctgaaaaagaagatctcagacaagtgccggaaaagaacagtttgtctcaactgctct
gcctttaacggtccagtgaaaaaatgtgggttgctgaagattatccatgaaaagtacaag
acgaacaagaaggttgtggatacattggtgtctgaatttcttcagtcctttgacactgcg
atagaacataacaaagaagtggaatcattactgaacagggcccaggaaaatctgaatcca
ctgctggtgctgaacttgttcaagaggatcccttcagaggatgtcccgctgctgctgatg
aaccctgaggcaggcaagccagccgatctcatcctcacccgactcctagtccccccgctc
tgcatccggccctcagtcgtcagcgacctcaagtccggcaccaacgaagatgacctcacc
atgaaactcacagagatcatctttctcaacgatgtcatcaaaaagcaccgcatgtctgga
gcgaagacccagatgatcatggaggactgggactttctgcagctacaatgtgccctttac
atcaacagcgagctgtcgggcatccctctcaacatggcgcccaagaagtggaccaggggc
tttgtgcagaggctcaaggggaaacaaggacggttcagggggaacctttctggaaagaga
gtggatttctctggacgtacagtcatctccccagaccctaacttgcggatcgacgaagtc
gctgtgccagttcacgtggccaaaattctgacgtacccagagaaggtgaataaggccaat
atagagctcatgcggaagcttgttcgcaatgggcccgaccttcaccctggagccaatttc
attcagcagaggcatactcagatgaaaagatttctgaagtatggcaaccgggagaagatg
gcccaggagttgaagtttggagacattgtggagaggcatatgattgatggggacattgtg
ctattcaaccggcagccctccctgcacaaactcagcatcatggcacacatagcccgggtg
aagccccatagaactttccgcttcaatgagtgtgtgtgcacgccctacaacgcagacttt
gatggggatgaaatgaacctgcaccttccgcagacagaggaagccaaagcggaggccctg
gtgctgatgggaaccaaagccaatctggtaacaccccggaatggagagcccctcattgct
gctatccaggacttcctgacaggcgcctaccttctcactctgaaagacactttcttcgat
agagcgaaagtatgtcagatagtagcctctattctcgttgggaaagacgaaaaggtcaag
attgcccttccaccccctgctattttgaagcccatcagactctggactgggaagcaggtc
ttcagtctcatccttaagcccagcaagttgtgtcccgtaaaggccaacctgaggaccaag
ggaaagcagtactgtggccgtggcgaggacttgtgccccaatgactcctttgttgtgatc
cagaacagtgagctcatgtgtggcagtatggacaagggcaccttgggttctggctccaag
aacaacatcttctacatcctgctgagggactggggtcagctggaagcggccaacgccatg
tcccgcctggccaggctggcacctgtctacctctccaaccgagggttctccatcggcatc
ggggacgttactccaggtcagggactgctgaaggccaagcaggacctcctggacgccggc
tacaagaaatgcgacgagtacatcgaggcactaaagacggggaaactgcagcagcagcca
ggctgcacagcagaggagaccctggaggccctcattctaaaggagctctctgtgatcaga
gaccacgcaggcagcgcttgcttgactgagctggacaaaagcaatagccccctaattatg
gcactgtgcggctctaaagggtccttcattaacatctcgcagatgatcgcctgcgtgggc
cagcaagccatcagcggctcccgtgtgcccgacggctttgagaaccgctccctgccccat
ttcgagaagcactccaaacttccagcagctaagggctttgtggcggacagcttctattca
ggcttgactcccactgagtttttcttccataccatggccggtcgagagggtctggtggac
acggctgtgaaaacggctgaaacaggatacatgcagaggcgtctggtcaagtctctggaa
gatctctgctcccagtatgacctcacggtgcgcagctccaccggtgacattgtgcagttc
atatacggaggtgacggcctggatccagctgccatggagggcaaggacgagcctctggaa
ttcaaaagggtgctggacaacgttagggctgtgtatacatgtccagagcagccagcgctc
agcaagaacgagctggagctcacggcagagtccatcatgaagaggaatgatttcctgtgc
tgcagagacagcttcctggaggagatcaggaagttcataaagacaatatcagaaaaaata
aagaagacccgagacaaatatggcatcaacgataacggcacaacagagcctcgagttctg
taccagctggacaggatcactcccacccagctggagaagtttctagagacgtgcagagac
aagtatatgagggcccagatggagccaggctcagcagtgggtgctctctgcgcccagagc
ataggggagcctggcacacagatgaccctcaagacgttccactttgctggtgtcgcttcc
atgaacatcaccctgggggtcccccgaattaaagagattatcaacgcctccaagaacatc
agtaccccgataatcagcgcacacttggatattgaggatgatgccgactttgcacgactt
gtgaaaggaaggattgaaaagacgcttcttggggagatttcggagtacattgaagaggtt
tttctaccagatgactgcttcattctcgtgaaactgtcactggaaagaattcggcttctt
cgattggaggttaacgcagagactgtgcgctactccatctgcatgtcgaagctgagggtg
aagccgggcgacatcgccgtgcacggggaggcggtggtctgcgtgtcccctcgggagaac
agcaagagctccatgtactacgtactgcagtctttgaaggaggagcttcccaaaattgtg
gtgcagggcattccagaggtgtcgagagcagtcatccacattgatgagcagagcggcaaa
gagaagtacaagcttttagtggaaggcgataaccttcgtgccgtcatggcaactcacggc
gtcaacggcagcagaacttcttcaaataatacctacgaggttgagaagaccctgggcatc
gaggctgcaagaacaactataatcaatgagatccaatacacaatggtgaaccacggcatg
agcatagacagaagacatgtcatgctgctcgctgatctcatgtcatataagggtgaaatc
cttggaattaccaggtttggactggccaaaatgaaggaaagcgtcctgatgctggcgtca
ttcgagaaaaccgctgaccaccttttcgacgcctcatactttggacagaaagactctgtc
tgtggtgtatcggagtgcattatcatggggatcccaatgaacattggaacaggcctgttc
aaactcttacacagagctgacaaagacccggcgccacccaaaaggccgctgctcttcgac
aacggcgaattccacatttccctggtcacatag
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