Scleropages formosus (Asian bonytongue): 108939779
Help
Entry
108939779 CDS
T04919
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04020
Calcium signaling pathway
sfm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108939779
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108939779
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108939779
Ion channels [BR:
sfm04040
]
Ligand-gated channels
Glutamate (ionotropic)
108939779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
108939779
NCBI-ProteinID:
XP_018616896
LinkDB
All DBs
Position
20:16282366..16343985
Genome browser
AA seq
1379 aa
AA seq
DB search
MGIQLGQLSASLWPLFVILLHDAPCYRGRPFGQDTVNVAVVFSGSTYQVEIKGRLSRENF
LDLPLEVNPITVLVNDTNPRALLTRICDTLAAHHVHGVVFEDNIGSEAVAQILDFISTQT
AVPIVGISGGSAVVLPHKGDGSTFLQLGSSIEQQITAMFKVMEEYDWGNFVVITSLYPGY
ETFADYIRSFTDTSYFLWELQDVLTFEMSEGADDIRTRRTLQQVDAQVLLVYCSHEEADY
LFTMATEAGLVGPGYIWIIPSLAVGNPDVMPPDSFPVGLISIATDSWKKSLRQRVRDGVA
IVVNGVESFRRHQGFVPEGYSDCHSPIQHPNNNTLFRHMLNVTWEHRDLSFNDDGYLTNP
SMVIITLDRERQWDKVGSYEMGILRMRYPVWPRYGSFLEPMSDNRHLTVATLEERPFVIV
ESVDPDTGTCVRNTVPCRRQSNRTEMIAGHSEPYTKLCCKGFCIDILKKLSRTIKFSYDL
YLVTNGKHGKMVRGVWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMV
ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYFSPVGYNRSLVSAKAPGGP
TFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQ
YIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHAHMMKYNQKGVEDAL
NSLKSGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRPIDL
ALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAW
EHLLYWKLRHSVRKSDRLDFLLAISRGIYSCFSGVEDPDRSVNIQNPDVTTNYAQANMLK
MLQTAKDIVSSAKVENSLENATKTIENWSRHNDIKGALQPRVPQAAPGEVAPGRCPYISS
ITDNHLPFSQCPLTPTFAVQCGESANQPLLEQQRVVPQHGPIHYTIPIHGSRPYNRTLPI
SSLSSPVIISRNPVAATPDPHHSGGLFVDSRHDGSTFIPYTEVQVPNLYVERKEPACHKP
SSDGPKRKKRSHSHLDESSRPRRRYNYGERAMSLSELRANHLMDTHDPATLGGVNSLYSK
GGGSCRSCVRPYLEPEQDDVPLLGKEKLNRRASFLKATWGGDRICQLDEGPPALPDLFPR
AEAAQPTKLYGTVGRSLCYPLPMKQTYLHSGHHIPYKGQRLKYSQSARLPSYREAVFQNT
AALRRSSTMLHRHCATYLNSYGELPLYIGPSAVYEQPKEMCPLFSCVGHYPEGTAAVPRQ
VTCQDGVYGVYADPGRIREEPALTVPHNRDKRRMVVTQKVTSSYVPKNWSRVSSLESEV
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgggcattcaactaggacagctgagtgcctccctttggcctctgtttgtgatcctgctc
cacgatgccccttgctaccggggtcggcctttcggacaggacacagtcaacgtggcagta
gtattcagcggatccacctaccaggtagagatcaaaggacggttgagccgggagaacttt
ctggatctgcctcttgaggtaaaccccatcacagtgctggtgaatgacacaaaccctcgg
gccctgctcacccgcatctgtgacacactggcagcccaccatgtacatggagtggtcttt
gaagataacatcggctctgaggctgttgctcagatcctggatttcatctccacacagaca
gcagtgcccatcgtgggcatcagtggaggatcagctgtcgttcttccgcacaagggtgat
ggctcgacatttcttcagctgggctcatccatagagcagcagattactgccatgttcaag
gtgatggaggaatatgactggggtaactttgtggtgatcaccagcctatatcctggttat
gagacctttgcggactatatccgctctttcacggacaccagctatttcctatgggagctg
caggatgtactgaccttcgagatgtcagagggggccgacgacatccgcactcgtcgtacg
ctgcagcaggtggatgcccaggtgctgctggtatactgctcccatgaggaggcagactac
ctgttcactatggcgacagaggctgggctggttgggccaggctacatctggatcatcccc
agtctggctgtggggaaccctgatgtgatgcccccagacagtttccccgtgggcctcatc
agcattgctacggacagctggaagaagagcctacgtcagcgtgtgcgggacggggtggcc
atcgtggtcaatggtgtggagagcttccgaagacaccaggggtttgtcccagagggttac
agcgactgccatagccctatccaacatcccaacaacaacaccctgttcagacacatgttg
aatgtgacatgggaacacagggacttgtccttcaatgatgacggctacctaaccaatccc
tccatggtgatcataactctggatagagagcgacagtgggacaaggtggggagctatgag
atgggtatcctccggatgcgttaccctgtatggccacgctacggcagcttcctggaaccc
atgtccgacaaccggcatctgactgtggcaactctagaggagcggcccttcgtaattgtt
gaaagtgtggaccctgacacgggcacctgcgtgcgcaacacagttccctgccgtcgccaa
tccaataggacagagatgattgcaggtcattcagaaccatacaccaaactttgttgcaag
ggcttctgcatagacatccttaagaaactctctcgcaccataaagttttcttatgatctc
tatctggtcaccaacggcaagcatggaaagatggtccggggtgtctggaatggaatgatt
ggagaggtgttttataagagggccgatatggccatcggatcccttactatcaatgaggag
cgctccgaaattattgacttctctgtgccatttgtggagactggaatcagtgtcatggtg
gctaggagtaatgggactgtgtccccctcggctttccttgagccatatagccctgcagtg
tgggtcatgatgtttgtcatgtgcctcacggtggtggctgttacggtcttcatctttgaa
tatttcagccccgttggatataatcgcagccttgtcagtgccaaagctcctggtgggccc
accttcaccattgggaagtcggtctggctcctgtggggaattgtcttcaacaactctgtc
cccattgagaaccccaaaggcactaccagcaagatcatggtccttgtgtgggcttttttt
gctgtcattttcctggccagctacactgctaacttggctgcctttatgatccaggaacaa
tacattgacacagtctctgggctcagtgacaaaaagttccagaagcctcaggagcattat
cctccatttcggtttggcacggtccccaacgggagcactgagaggaacattcgcagcaac
tatccagacatgcatgctcacatgatgaagtataaccagaaaggagtagaggatgcccta
aacagcctcaaatcagggaagctcgatgccttcatatacgacgcagcagtgctaaattac
atggctggcaaagatgagggctgcaagctggtcaccattggcagtgggaaagtatttgca
actacaggctatggcattgctctgcagaaagactcgcgctggaagcgccccattgacctg
gccctactccagttcctgggagatggagacacccagaggttggagacagtatggctgtca
ggcatctgtcagaatgagaagaacgaggtgatgagttccaagctggacatcgacaacatg
gcgggggttttctatatgctgttggtggccatgggcctgagcttacttgtctttgcctgg
gagcacctgctgtactggaagctacgccactctgttcgcaagtctgaccgtctggatttc
ctgctcgccatcagcaggggcatatatagttgcttcagtggagtagaggatcctgaccgg
tctgtgaacatccagaaccctgatgtcaccaccaactatgcccaagcaaacatgctaaag
atgctccaaactgccaaagacatagtatcctcggccaaagtggagaactccctggaaaat
gccaccaagaccattgaaaactggagtcgacacaatgacatcaagggtgccctccaaccc
agggtaccacaggcagccccaggtgaagtggcaccaggacgctgcccctatatttccagc
attactgacaaccacttgcccttctcacagtgccccctgactcccacatttgctgtgcag
tgtggcgagagtgccaaccagccgctgctggagcagcagagggtggtgccacagcatggc
ccaatccactacacgattcccattcatggcagccggccctacaacaggacactgcccatt
tccagcctcagtagccctgtaattatctcaaggaaccccgtggctgccactccagatcct
caccacagtggtgggttgtttgtagattcacggcatgatggctccacattcattccgtac
acagaggttcaagtgccaaacctttatgtggaacgtaaagagcctgcttgccacaagccc
tcatctgatggccccaagcgcaagaaacgatctcatagtcacctggatgagtcctcacgg
ccgaggcgacggtacaactatggggagcgggccatgagtctctctgaactgagagctaac
cacctcatggacacccatgaccctgccaccctgggtggtgtgaacagcctctactcaaag
ggtggtggcagttgcagatcctgtgttagaccttacttggagccagagcaggatgatgtg
cctctcttggggaaggagaagctcaatcgaagggcctcattccttaaggccacctgggga
ggtgacaggatctgccaactagacgagggaccccctgccttgccagacctgtttccacgt
gcagaagctgcccaacccactaagctgtatggtactgtggggagaagcctgtgctacccg
ctacccatgaagcagacctacctccactcaggccaccacatcccatacaaggggcagagg
ctgaagtactcacaatccgcccggctgccctcttatcgggaagcagttttccagaacaca
gctgccctccgcaggtcctccaccatgctgcacagacactgtgccacctacttgaactcc
tacggagagctcccactatacattggaccatccgctgtttatgagcagcccaaggagatg
tgcccccttttctcgtgtgtaggccattaccctgagggcacagccgctgtgcccagacaa
gtgacttgccaggatggtgtgtatggggtgtatgctgacccagggcgaattcgggaggag
cctgcactgactgtgccccacaacagagacaagaggcgcatggtggttactcagaaggtc
accagttcatatgtgccaaagaactggagcagggtctccagcctggaatctgaggtttga
DBGET
integrated database retrieval system
