Scleropages formosus (Asian bonytongue): 108940743
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Entry
108940743 CDS
T04919
Symbol
glb1
Name
(RefSeq) beta-galactosidase isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm00052
Galactose metabolism
sfm00511
Other glycan degradation
sfm00531
Glycosaminoglycan degradation
sfm00600
Sphingolipid metabolism
sfm00604
Glycosphingolipid biosynthesis - ganglio series
sfm01100
Metabolic pathways
sfm04142
Lysosome
Module
sfm_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108940743 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
108940743 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108940743 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
108940743 (glb1)
00511 Other glycan degradation
108940743 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108940743 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108940743 (glb1)
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
108940743 (glb1)
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108940743 (glb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
108940743
NCBI-ProteinID:
XP_018618619
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All DBs
Position
18:9507807..9521309
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AA seq
653 aa
AA seq
DB search
MAFCVYVLLLWFAGAAFKSTLAAPRTFEIDYKNNCFRKDGDPFRYISGSIHYSRIPRVYW
KDRLLKMYMAGLNAIQTYVPWNYHEPVPNQYIFSGDRDLEYFLQLANDIGFLVVLRPGPY
ICAEWDMGGLPAWLLNKTDIVLRSSDPDYIRAVDNWMGNLLPKIKPFLYQNGGPIITVQV
ENEYGSYFACDYNYLRHLTQLFRHHLGNEVVLFTTDGASVGFLKCGSLQDLYATVDFGPG
GNVTAAFAAQRYAEPHGPLVNSEFYTGWLDHWGEHHSVVSASIVAKSLNEILEAGASVNL
YMFIGGTNFGYWNGANTPYAPQPTSYDYDAPLTEAGDLTGKYFAIRHVIQQYKSIPEGPV
PPSTPKYAYGAVKMNKLKTLSEALDTVSFSGPVKTIYPLTFTDINQHFGYVLYRTKLPMN
CSTPTPLSSPLNGVRDRAYVSVDGVAAGVLERDKYITINITGTAGSQLDVLVENMGRVNY
GKGINDFKGLTSNLTLNSKVLTDWLVYSLSIDEAVSQGLLTGSQTEEMWSTLVTPLSAPA
FYSGTFSIPNGIPDLPQDTYIEFPGWTKGQVWMNGFNLGRYWPKRGPQLTLYVPAHVLST
DAPNNVTLLELESDPCSSGSCTVQFTAIPVINSTVAHTTAHAFHSFFHKGDLL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctttctgtgtgtatgtgctgcttctgtggtttgccggtgccgccttcaaaagtaca
cttgcagccccgcgtacttttgagatcgactacaagaacaactgtttccgcaaggatgga
gacccattccgctacatctctggcagtatccattatagcaggattccgagggtctactgg
aaggaccgattgctcaagatgtacatggctggtctgaatgcaattcaaacgtatgttccc
tggaactatcatgagccagttcccaatcagtacatcttcagtggagacagagacttggag
tacttccttcagctggccaatgatattggctttctggttgttttgagaccaggaccatat
atatgtgcagaatgggatatgggtggacttcctgcttggctgctcaataaaactgatata
gttcttcgatcctctgacccagattatataagagctgtggacaactggatgggtaatctg
cttccaaagattaaaccattcctctatcagaatggaggcccaattattacagttcaggtg
gagaatgagtacgggagttacttcgcatgcgactacaactaccttcgccaccttactcag
ctgtttcgccaccatctgggcaatgaggtggtgctgttcaccacagatggagcatcggtt
ggtttccttaaatgcggttccttgcaggacctctatgcaacagtggattttggcccaggt
ggaaatgtaacagctgccttcgctgcacaaagatatgctgagccccatggtcctctggtc
aactcggagttttacacaggctggctcgatcactggggggagcaccactctgtcgtgtct
gcgtccattgtggcaaagtccctcaatgaaattcttgaagcaggagccagtgtaaatcta
tacatgtttattggaggaacaaattttggatactggaatggtgccaacaccccctatgca
ccccagcccaccagctatgactatgatgccccccttaccgaagctggagatctcacagga
aagtactttgccatacgccatgtgatacaacagtacaaaagcataccagaaggcccagta
ccaccatcaacaccaaagtacgcgtatggagctgtcaaaatgaacaagctgaagaccttg
tctgaagctttagacacagtgtcattctccggtcctgtgaaaaccatctaccctctgact
ttcactgacattaaccagcactttggatatgtgctgtatcgcaccaagttacccatgaac
tgcagcacacccacccctctttcttcaccactcaacggagttcgtgatcgtgcctatgtt
tctgtggatggtgttgcagcgggtgtccttgaaagagacaagtatataaccatcaatatc
acagggacggccgggagtcaactggatgtcctggtggagaacatggggcgagtgaactat
ggaaagggcatcaatgactttaaggggttgacgtccaacctgaccctcaattctaaggtg
ctcacagactggctggtctatagcctgagtatcgatgaggcagtgagtcagggcctgctg
acaggaagccaaacagaggagatgtggagcaccctggtcacacccctctctgcgcctgcg
ttctatagcggcactttcagcatcccaaatggtataccagacctgcctcaagacacatac
attgagtttcccggctggaccaagggacaagtctggatgaacggcttcaatttgggtcgg
tattggccgaaaagaggtccccagctcacgctgtatgtccctgctcatgtgctgagtacg
gacgctcccaacaatgtgaccttgctggaactagagtccgacccttgttcctcaggatcc
tgcactgtacagtttaccgccatccctgtcatcaacagcacagtagcccacaccacagcc
cacgcgtttcacagctttttccacaaaggtgacttattgtga
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