Shigella flexneri 2003036: SFy_0446
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Entry
SFy_0446 CDS
T03267
Name
(GenBank) IspA
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sfn
Shigella flexneri 2003036
Pathway
sfn00900
Terpenoid backbone biosynthesis
sfn01100
Metabolic pathways
sfn01110
Biosynthesis of secondary metabolites
Module
sfn_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SFy_0446
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sfn01006
]
SFy_0446
Enzymes [BR:
sfn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SFy_0446
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SFy_0446
Prenyltransferases [BR:
sfn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SFy_0446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Arm-DNA-bind_3
Motif
Other DBs
NCBI-ProteinID:
AIL34299
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All DBs
Position
complement(350440..351339)
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AA seq
299 aa
AA seq
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MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFG
VSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL
AFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRH
KTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARKKARDLIDDARQALKQLAEQSLDTSALEALADYIIQRNK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggactttccgcagcaactcgaagcctgcgttaagcaggccaaccaggcgctgagccgt
tttatcgccccactgccctttcagaacactcccgtggtcgaaaccatgcagtatggcgca
ttattaggtggtaagcgcctgcgacctttcctggtttatgccaccggtcatatgtttggc
gttagcacaaacacgctggacgcacccgctgctgccgtagagtgtatccacgcttactca
ttaattcatgatgatttaccggcgatggatgatgacgatctgcgtcgcggtttgccgacc
tgccatgtgaagtttggcgaagcaaacgcgattctcgctggcgacgctttacaaacgctg
gcgttctcgattctaagcgatgccaatatgccggaagtgtcggatcgcgacagaatttcg
atgatttctgaactggcgagcgccagcggtattgccggaatgtgcggtggtcaggcatta
gatttagacgcggaaggcaaacacgtacctctggacgcgcttgagcgtattcatcgtcat
aaaaccggcgcattgattcgcgccgccgttcgccttggtgcattaagcgccggagataaa
gggcgtcgtgctctgccagtactcgacaagtacgcagagagcatcggccttgccttccag
gttcaggatgacatcctggatgtggtaggagatactgcaacgttgggaaaacgccagggt
gccgaccagcaacttggtaaaagtacctaccctgcacttctgggtcttgagcaagcccgg
aagaaagcccgggatctgatcgacgatgcccgtcaggcgctgaaacaactggctgaacag
tcactcgatacctcggcactggaagcgctagcggactacatcatccagcgtaataaataa
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