Chania multitudinisentens: Z042_11475
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Entry
Z042_11475 CDS
T02987
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
sfo
Chania multitudinisentens
Pathway
sfo00540
Lipopolysaccharide biosynthesis
sfo01100
Metabolic pathways
sfo01250
Biosynthesis of nucleotide sugars
Module
sfo_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Z042_11475 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfo01005
]
Z042_11475 (rfaD)
Enzymes [BR:
sfo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Z042_11475 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
sfo01005
]
Core region
Z042_11475 (rfaD)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AHG20178
UniProt:
W0L8N5
LinkDB
All DBs
Position
complement(1039260..1040192)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGMIGSNIIKALNDKGYRDILVVDNLKDGTKFVNLVDLDIADYMDKEDFIASI
IAGDDLGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHFCLDRQIPFLYASSAATY
GGRTDNFIEERQYEQPLNVYGYSKFLFDQYVREILPEADSQVCGFRYFNVYGPREGHKGS
MASVAFHLNNQITRGENPKLFSGSENFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ETFQAVADAVVEYHQTGAVEYIEFPEKLKGRYQAYTQADQTKLRAAGYNAPFKTVAEGVK
EYMAWLNRTA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggcggtgctggcatgatcggcagcaacatcattaaggcactgaat
gataaaggatatcgcgatatcctggtggtggataacctgaaagatggcaccaaattcgtc
aacctggtcgacctggatatcgccgactatatggacaaagaagatttcattgccagcatc
attgccggtgacgatctcggtgatatcgacgctatcttccatgaaggtgcctgctcatcc
accaccgaatgggatggcaaatacatgatggacaacaactatcagtattctaaagacatc
ctgcacttctgcctggatcgccaaatcccattcctgtatgcctcttccgccgcgacttac
ggtggccgcaccgataactttatcgaagaacgccagtatgaacagccactgaacgtttac
ggctactcaaaattcctgttcgaccaatatgtgcgtgaaatcctgccagaagcggattcg
caggtgtgcggcttccgctatttcaacgtttatggccctcgtgaaggccataaaggcagt
atggccagcgtggcgttccacctgaacaaccagattacccgtggtgagaacccgaaattg
ttttctggcagtgaaaatttcaaacgtgatttcatctatgtgggtgacgtggcggcggtc
aatctgtggttctggcagaatggcgtatccggcattttcaactgcggaaccggtcgggca
gaaactttccaggcggtggccgatgcggtggtggaataccatcagaccggggccgtggaa
tacattgaattccctgaaaaactgaaaggccgttatcaggcatacacccaggccgatcag
accaaactgcgcgctgctggctacaatgcgccgttcaaaacggtcgctgaaggcgtgaaa
gagtacatggcctggctaaatcgtaccgcataa
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