Streptomyces flavofungini: QUY26_09730
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Entry
QUY26_09730 CDS
T09698
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sfp
Streptomyces flavofungini
Brite
KEGG Orthology (KO) [BR:
sfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfp03009
]
QUY26_09730 (rimO)
Enzymes [BR:
sfp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QUY26_09730 (rimO)
Ribosome biogenesis [BR:
sfp03009
]
Prokaryotic type
ribosomal protein modification factors
QUY26_09730 (rimO)
BRITE hierarchy
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WJV45790
LinkDB
All DBs
Position
complement(2497259..2498788)
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AA seq
509 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWDLVEDAENADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQEAGTEVSLPGHAPVDLPEGLAPASGPRAPLRRRLG
SNPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVMLVSENNT
SYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLIDVLTSTEKVAPYFDLSF
QHSAPGVLRAMRRFGDTDRFLELLETIRGKAPQAGVRSNFIVGFPGETEADVAELERFLT
GARLDAIGVFGYSDEEGTEAATYEHKLDQDTVDERLARVSRLAEELTSQRAEERLGERLE
VLIESVDDEDGAIGRAAHQAPETDGQIRFADATAGEPLHVGRMVVAKVVGTEGVDLVAEQ
CELLGEGAGAGPEGPGAGRSRGVGEGTGR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgcaccgtcgcccttgtcacgcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctgggacctcgtggaggacgccgag
aacgcggacgtcgccgtcgtcaacacctgtggcttcgtcgaagccgccaagaaggactcc
gtagacgccctgctcgaagccaatgacctcaagggtcacggcaggacgcaggccgtcgtg
gccgtcggctgcatggccgagcgctacggcaaggacctggccgaggcgctgcccgaagcc
gacggcgtcctcggcttcgacgactacgccgacatctccgaccgcctgcagaccatcctc
aacggcggcatccacgcctcgcacaccccgcgcgaccgccgcaagctgctcccgatcagc
cccgccgagcgccaggaagcgggcacagaggtctccctgcccggtcacgcgcccgtggac
ctgcccgagggcctcgcgcccgcctccgggccgcgtgcgcccctgcgccgccgtctgggg
agcaacccggtcgcctcggtgaagctcgcctccggctgcgaccgcaggtgctcgttctgc
gccatcccgtccttccgcggctccttcatctcgcgccgcccctcggacgtgctcggcgag
acccgctggctggccgagcagggcgtcaaggaggtcatgctggtctccgagaacaacacc
tcgtacggcaaggatctcggcgacatccggctcctggagacgctgctgcccgagctggcg
gccgtcgacggcatcgagcgcgtccgggtcagctatctgcagcccgccgagatgcgtccc
ggcctcatcgacgtcctgacgtccacggagaaggtcgcgccgtacttcgacctctccttc
cagcactccgcgcccggcgtgctgcgcgcgatgcgccgcttcggggacaccgaccgcttc
ctggagctcctggagaccatccgcgggaaggcgccgcaggccggcgtgcgctccaacttc
atcgtcggcttccccggcgagaccgaggccgacgtcgccgagctggagcggttcctcacg
ggcgcccggctcgacgcgatcggcgtcttcgggtactccgacgaggagggcaccgaagcc
gcgacgtacgagcacaagctcgaccaggacaccgtcgacgagcggctcgcccgggtctcg
cggctcgcggaggagctgacctcgcagcgcgccgaggagcgcctcggcgagcgactggag
gtgctgatcgagtccgtcgacgacgaggacggcgccatcgggcgggccgcgcaccaggcg
cccgagacggacggccagatccgattcgcggacgcgacggctggggagcccttgcacgtc
ggccgtatggtcgtggcaaaggtggtcggcacggaaggcgtggatctggtggcggagcag
tgcgagctcctgggagaaggggccggagcaggccccgagggccccggtgcgggccggtcc
cggggcgtcggcgaagggacgggcagatga
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