KEGG   Shewanella frigidimarina: Sfri_0568
Entry
Sfri_0568         CDS       T00395                                 
Name
(GenBank) L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
sfr  Shewanella frigidimarina
Pathway
sfr00250  Alanine, aspartate and glutamate metabolism
sfr00330  Arginine and proline metabolism
sfr01100  Metabolic pathways
sfr01110  Biosynthesis of secondary metabolites
Module
sfr_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Sfri_0568
   00330 Arginine and proline metabolism
    Sfri_0568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sfr03000]
    Sfri_0568
Enzymes [BR:sfr01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     Sfri_0568
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     Sfri_0568
Transcription factors [BR:sfr03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    Sfri_0568
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH TAFII28
Other DBs
NCBI-ProteinID: ABI70429
UniProt: Q087Y6
LinkDB
Position
658135..661329
AA seq 1064 aa
MEANTMFKASEVLDGRYDNATLEELFTAVTNNYIVDEEQYLSELIKLVPSSEQDIEQVTR
RAHELVSKVRQFEKKGLMVGIDAFLQQYSLETKEGIILMCLAEALLRIPDAATADALIQD
KLSGAKWDEHLNKSESLLVNASTWGLMLTGKLVKLDRNTDGSPSHILKRLVNRVGEPMIR
QAMLAAMKIMGKQFVLGEDVKEALKNSEAKRKLGYTHSYDMLGEAALTANDAQKYFNDYS
NAIRDLGEQQYDEANSPRPTISIKLSALHPRYEVANEDRVLSELYDTVIKLIVQARELNI
GISIDAEEVDRLELSLKLFKQLYQSEAAKGWGLLGIVVQAYSKRCLPVLCWLTRLAKDQG
DEIPLRLVKGAYWDSELKWAQQAGERGYPLYTRKAGTDVSYLACARYLLSEATRGAIYPQ
FATHNAQTVASIDAMAGNRIYEFQRLHGMGQELYDTMLAESGAKAVRIYAPIGAHKDLLP
YLVRRLLENGANTSFVHKLVDPNTPIESLVVHPLVTLLGYKSLANQKIVKPADIFGAERK
NSKGLNMNIISESEPFFAALDKYSDTQWTAGPLVNGKTLTGEVQTVVSPYDTSLTVGTVA
FADANAIEQAIAGADAAFGSWVRTPVETRANALQKLADLLEENREELIVLCTREAGKSIQ
DGIDEVREAVDFCRYYAVQAKKMMAQPELLPGPTGELNELFLQGRGIFVCISPWNFPLAI
FLGQVSAALAAGNTVIAKPAEQTCLIGYRAVQLAHEAGIPTDVLQFLPGTGAVVGSAITA
DERIGGVCFTGSTGTAKLINRTLANRDGAIIPLIAETGGQNAMVVDSTSQPEQVVNDVVS
SSFTSAGQRCSALRVLFLQEDIADRVIEVMKGAMEQLVIGNPSSVKTDVGPVIDATAKAN
LNAHIDHISQVGKLINKLELPAGTENGHFVAPTAVEISSIKLLEKEHFGPILHVIRYKAA
DLAKVVDEINSTGFGLTLGIHSRNEGHALSLADKVNVGNVYINRNQIGAVVGVQPFGGQG
LSGTGPKAGGPHYLTRFVTEKTRTNNITAIGGNATLLSLGDAEE
NT seq 3195 nt   +upstreamnt  +downstreamnt
atggaagcgaatactatgttcaaagcgagtgaagtactggacggccgctacgacaatgcc
actcttgaggaactgtttactgcagtgaccaacaattacattgtcgatgaagagcaatac
ctgtctgaattaattaagcttgtgccttcgtctgaacaagacattgagcaagtgactcgt
cgcgcccatgagctcgtgagcaaagttcgtcagtttgagaaaaaaggcctgatggttggt
attgatgcatttttgcagcaatacagcttagaaacaaaagaaggcattatcttaatgtgc
ttggctgaagccttgttacgtattcctgacgcggcaaccgcggatgcgcttatccaagat
aaactgtctggtgccaagtgggatgaacaccttaataagagtgagtcattactggttaac
gcctcaacatggggcttaatgctgaccggtaaactggttaagttagatcgtaatactgac
ggttcgccaagtcatatacttaaacgtctggttaatcgtgttggtgagccaatgatccgc
caagccatgcttgcagcaatgaagatcatgggtaagcaatttgtgttaggtgaggacgtt
aaagaagcacttaaaaatagtgaagctaaacgtaagttaggttatacccatagctatgac
atgttaggtgaagcagcattaaccgccaatgatgcgcaaaagtattttaacgattacagc
aatgctattcgcgatttaggcgaacagcaatacgatgaagcgaactcaccaagacccacc
atatcaatcaaactatctgctttgcaccctcgttatgaagtcgctaacgaggatcgtgta
ttaagtgaattatacgacacagttattaagctgatagtacaagcgcgtgaacttaacatt
ggtatttctattgatgctgaagaagttgaccgtcttgaattgtcattgaagttatttaag
cagctttatcagtcagaagccgctaaaggctggggcttattaggcattgtggtgcaagct
tattctaagcgttgtttaccggtgttgtgttggttgacgcgtcttgctaaagatcaaggc
gatgaaattccgctgcgtttagttaaaggtgcttattgggacagtgagcttaaatgggca
caacaagcgggtgagcgtggttacccactctatacccgtaaagcaggtactgacgtgtca
tatcttgcttgcgcacgttatttgctgtctgaagccacccgtggtgcgatttacccacaa
tttgccacccataacgctcaaaccgttgccagcattgatgcgatggcaggtaatcgtata
tatgagttccaacgtttacacggcatggggcaagagctttacgacactatgcttgcagaa
agcggtgctaaagcggtacgtatctatgcccccattggcgcccataaagacttactgccg
tatttagtacgccgtttacttgaaaacggtgccaatacctcatttgtgcataaactggtc
gaccctaatacgccgattgaaagcttagtcgttcatccattggtgacgctattaggttac
aagtcgttagcgaatcaaaaaattgttaaacctgctgatattttcggtgcagaacgtaag
aactctaaaggattaaacatgaacattatttctgagtcagagccattttttgctgcactg
gataaatatagcgatactcaatggaccgcgggtccattggtaaacggtaaaacattaacg
ggtgaagtacaaactgttgttagcccatatgatacttcgctaaccgtcggtaccgtggct
tttgcagatgcaaacgcaattgagcaagccattgctggtgcagatgctgcttttggtagt
tgggttcgtacgcctgttgaaactcgagcgaatgcactacagaaattagctgatttattg
gaagaaaatcgtgaagagctgattgtattatgtacccgtgaagcgggtaagagcattcaa
gacggcattgatgaagttcgtgaagcagtcgatttttgtcgttactacgcggtacaagct
aagaagatgatggctcagcctgaattacttcctggcccgacaggcgagttgaacgaactg
tttttacaaggccgcggaatttttgtgtgtattagtccatggaacttcccgttggcgatt
ttcttaggccaagtatctgcagcacttgccgcggggaatactgttattgccaagcctgcg
gagcaaacctgtttaatcggttatcgtgcagtacaacttgcgcatgaagccggtattcct
accgatgtattacagtttttaccaggtactggcgctgttgttggttctgcaatcactgca
gatgaacgtattggcggtgtgtgttttaccggctctactggcaccgctaaattgattaac
cgcactttggcaaaccgtgatggcgcaattattccattaattgctgaaaccggtggtcaa
aatgccatggttgtggactcaacatcacaaccagagcaagttgttaatgacgtagtttct
tcatcgttcaccagtgctggtcagcgttgttcggcattgcgagtcttatttttacaagaa
gatattgcagatcgcgtgattgaagtgatgaaaggcgccatggagcaattagtgattggc
aacccaagttcagttaaaactgacgtgggaccagtgattgatgccactgccaaagcaaac
ttgaatgcccacattgatcatatcagccaggtcggcaagttaattaataaacttgaatta
ccagcgggtactgaaaacggccattttgtagcgcctacagccgttgaaattagttctatt
aagttactcgaaaaagaacattttggtcctattttgcatgttattcgttataaagcggct
gatttggcaaaagtggttgatgaaatcaacagcacaggttttgggttaaccttaggtatt
cacagccgtaatgaaggccatgcgctgtcgcttgctgacaaagtaaacgtaggtaacgtg
tacattaaccgtaaccaaattggcgccgttgttggcgtgcaaccatttggtggtcaaggt
ttatcgggcaccggtcctaaagcgggtggcccgcattatttaactcgttttgtgaccgaa
aaaacgcgtactaataacattaccgcgattggtggtaatgcgacattattgtcactgggt
gatgctgaagaataa

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