Shewanella frigidimarina: Sfri_1390
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Entry
Sfri_1390 CDS
T00395
Name
(GenBank) FAD dependent oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_1390
Enzymes [BR:
sfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
Sfri_1390
Transfer RNA biogenesis [BR:
sfr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sfri_1390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
FAD_binding_2
Pyr_redox_3
Pyr_redox_2
F420_oxidored
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ABI71242
UniProt:
Q084S3
LinkDB
All DBs
Position
complement(1655505..1657598)
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AA seq
697 aa
AA seq
DB search
MNKTPLLSVSPNLHELHICELLGNNANQNSRYSHIVKQYIAEVLQSSDDKIAATNTQPHL
LTLGQLGFGDGHEIILLLAALQEANLQNPLIQQQTRIHISVFEQGPVNCKQLQHTWQQQG
LLDSDHHLFDFTQALLNGEIAAIEGCQRLSLLQNQIIIDLYQGSPLAQAKTIATPNKQRI
THWFALPHTNQEAHSDQYFHQRSVWEYGRLSVDNATFLAASTNDENIAPTIKKQLAFCGF
LSSTSFKSTDDIAIAERNALRQQLQQQFAYNPLPPLHSNNNSPIAIIGGGIASASLALSL
AERGKDVIIYCKDDTLGQGASGNKQGAIYPLLTPENGSLSQFFQQVFLYSRRRIQALVDD
GYDIGHEWCGVLHTGFDQRSQTRLDKIIDGQAWPSEIAFAVSPHQATQLANVDIDKPGFY
YPLGGWACPFEFAQASIAKAQTLTKVRIVYNSDISSLESHSSGWQLFSAEDNTPIATHEQ
VVIASGAQLTQYKQTKNLQITGFRGQVSHVPPQGELAQLNTVICANGYLTPQHNQLHCVG
ASYVKDPQHLDFCPIEQHENSLKMKQSFPNSNWPNDIDVSNNDARVGVRMVSRDHFPVMG
CAPDVEALFTRYAVQQQSKDKPSLWQHYWQTTPAPIYDGLYVLGGLGSRGLSSGPLVAEC
LAANLCGELSPLSVELQALLSPNRMWLRKLLKGKALM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaaacacctttattatctgtatccccgaacctacacgagttgcatatttgtgaa
ttactgggcaacaacgccaatcaaaatagccgatattcccacattgttaagcagtatatc
gccgaagtattgcaaagcagtgacgataaaatagcagccacaaatactcaaccacattta
ctaacgctaggccaactcggttttggcgatggccacgaaataatactattactggcagcc
ttacaagaggctaacttgcaaaatcctttgatacagcaacaaactcgaattcacatcagt
gtatttgaacaaggcccagtaaactgtaagcaactgcaacatacatggcaacaacaaggg
ctacttgattcagaccatcatttattcgattttacccaagcattactcaatggtgaaatt
gcagccatcgaaggttgccagcgactgagtctactccaaaaccaaattatcattgacctg
tatcaaggttcgccactagcgcaagccaaaaccattgctacgccgaataaacaaaggata
acacattggtttgccctaccccatacgaaccaagaggctcattcagatcaatattttcat
cagcgttcagtttgggaatatggtcgactcagtgttgataatgcaacatttttagcggct
agcacaaatgacgaaaatattgctccaactatcaaaaagcaactagcattttgcggattt
ttatcctccacatcattcaaatcgactgatgacattgctatcgcagaacgtaacgcgcta
agacaacaactacagcaacagtttgcttataacccattgccaccgttacattctaataac
aacagccctatagctattataggtggcggtatcgcttctgcaagtcttgccttgtctctg
gctgaacgcggcaaagatgtgattatttattgcaaagatgacacattaggacaaggcgca
tcaggcaacaaacaaggtgctatttatcccctgcttacacccgaaaatggctcgctaagt
caatttttccaacaagtctttctatacagtcgacgcagaattcaggcattagttgatgat
ggatatgacataggacatgagtggtgtggtgtattacacacaggtttcgatcaacgtagc
caaacaagattggataaaattattgatggccaagcatggccaagtgaaattgcttttgct
gtcagtccacaccaagctacacaacttgctaacgtcgatattgataaacctggcttttat
tatccattaggcggttgggcttgtccgtttgaattcgcacaagcaagtattgccaaagca
caaacattaaccaaagttcgcattgtctataatagcgacattagctcacttgaatcacac
tcatctggctggcaactgtttagcgccgaagacaatacccctatagcaacccacgaacag
gttgtcatcgcatcaggagctcaacttactcagtataaacagacaaaaaacctgcaaatc
actgggtttagaggtcaagttagccatgtaccgccacaaggtgaactggcacagcttaat
actgttatctgcgccaatggttatttaacgccacaacataaccaattacattgcgttgga
gcaagttatgtaaaagacccacaacatcttgatttttgcccgatagagcagcatgaaaac
agccttaaaatgaaacaaagctttcctaattcaaactggcctaatgatattgatgtttca
aacaacgatgccagagttggcgtaaggatggtcagtcgcgatcactttccggtaatgggt
tgtgcgcctgatgttgaagcgttatttacacgctatgctgttcaacagcaatcgaaagac
aaacccagtctatggcaacattactggcaaacaacaccagcaccaatttatgacgggtta
tatgtgttaggaggactaggctcacgcggcctaagctcaggcccattagtcgccgaatgc
ttagcagcaaatctatgtggcgaattatcaccattaagcgtagagctacaagccttactt
agccctaaccgaatgtggctgcgtaaactgcttaaaggaaaagcgttgatgtga
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