Shewanella frigidimarina: Sfri_2785
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Entry
Sfri_2785 CDS
T00395
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00730
Thiamine metabolism
sfr01100
Metabolic pathways
sfr01240
Biosynthesis of cofactors
sfr04122
Sulfur relay system
Module
sfr_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Sfri_2785
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Sfri_2785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_2785
Enzymes [BR:
sfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
Sfri_2785
Transfer RNA biogenesis [BR:
sfr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sfri_2785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
ABI72625
UniProt:
Q07ZD9
LinkDB
All DBs
Position
complement(3349868..3351322)
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKSVRMRFTKMLETNIRNVLKNVDEGAKVQRLYDRIIVQVPSDKPE
LCDVFADRLACIPGIAHVVQVSEYSFDSIDHIYQQALPKYRDEIAGKTFCVRVKRSGNHD
FNSIDVERYVGGGLNQHTEALGVKLKDPDVTVNLEINQDKLYMVERRIQGLGGFPMATQE
DVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKKYGESHKVR
FVSVPFEPVVEEILERIDNGQMGVVLKRVMMRAATRIADKYGIQALVTGESLGQVSSQTL
TNLNVIDRSTDLLILRPLIAMDKQDIINQSRIIGTEDFAKSIPEYCGVISQKPTVKAVLS
KVEAEELKFSEDLIDRVVASAVVMDIRDIEAEMNQQVTETETVKDVASGEIIIDVRAPEE
EERSPLLIDNVMVKAIPFFKLATQFADLDKSKTYLLYCDRGVMSKLQALYLVEQGYTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagctgtaccctgaaattatgatgaagagcaagtcggtaagaatg
cgctttaccaaaatgcttgaaactaatatacgtaatgtgcttaaaaatgtggatgaaggt
gcaaaagtacaacggttatacgatcgtatcatcgtgcaagtaccgagcgataaacctgaa
ttgtgtgacgtttttgcagatcgactagcttgtattccaggtattgctcatgtggtgcaa
gtgagtgagtacagttttgattcgatcgatcatatttatcagcaagctttgcctaaatac
cgtgatgaaattgccggtaaaactttttgtgtccgcgtaaaacgttctggtaatcatgac
tttaattcaattgatgttgagcgttatgtcggtggtggattaaatcaacacactgaggcg
ctaggggtaaaacttaaagaccctgacgtaaccgttaatcttgaaatcaatcaagataag
ctttacatggttgaacgtcgcattcaaggtttgggcggttttcctatggcgacacaagaa
gatgtgttgtcacttatttcgggtggtttcgattctggtgtgtcgagttttcagtttatt
aaaaaaggcgctcgtacccattactgtttctttaatttaggtggcgctcagcacgaaatt
ggcgttaagcaagtcgcgtatcacctgtggaaaaagtacggtgagtctcacaaagtacgt
tttgtgtcagtgccattcgagcccgtggttgaagagattttagagcgtattgataacggt
caaatgggtgtggtacttaaacgtgtaatgatgcgtgcagcgacacgtattgctgacaaa
tacggtattcaagcgttagtaacaggtgagagcttaggtcaagtatctagtcaaacactg
actaatctaaatgttatcgatcgcagtaccgatttattgattttacgcccgcttatcgca
atggataaacaagatattattaatcagagccgtattattggcactgaagattttgcgaag
tctattcccgagtattgtggtgtgatttcacaaaaacctacagttaaagcggtattatct
aaggttgaagcagaagagctgaaattctctgaagatttaatcgaccgtgtagtagcatct
gctgtggtaatggatattcgtgatattgaagctgaaatgaaccaacaagtgaccgaaact
gaaacggttaaagacgtggcttcaggtgaaataatcattgatgttcgtgctcctgaagaa
gaagagcgtagcccattattaattgataatgtaatggttaaagcgattccattctttaag
ttagcgacccaatttgccgatttagataagtctaaaacgtatttattgtattgtgaccgt
ggtgtgatgagtaagctgcaagccttatatcttgtagagcaaggttatactaacgttaaa
gtgtatcgtccttaa
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