Shewanella frigidimarina: Sfri_3372
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Entry
Sfri_3372 CDS
T00395
Name
(GenBank) KpsF/GutQ family protein
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00540
Lipopolysaccharide biosynthesis
sfr01100
Metabolic pathways
sfr01250
Biosynthesis of nucleotide sugars
Module
sfr_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Sfri_3372
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfr01005
]
Sfri_3372
Enzymes [BR:
sfr01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
Sfri_3372
Lipopolysaccharide biosynthesis proteins [BR:
sfr01005
]
Lipid A
Sfri_3372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
Glyoxalase_5
Motif
Other DBs
NCBI-ProteinID:
ABI73208
UniProt:
Q07XQ6
LinkDB
All DBs
Position
4019496..4020473
Genome browser
AA seq
325 aa
AA seq
DB search
MVNHTQFRQWGRKVIDIEKAALDNLYQYVDSVEFDQACQLIMQCKGKVIVMGMGKSGHIG
NKISATFASTGTPAFFVHPGEASHGDLGALAKNDIVLAISNSGESSEILTLMPVIQRMGV
PVIAVTGKPDSNMARLSKIHLCIQVQEEACPLGLAPTSSTTATLAMGDALAIALLQAKGF
TRDDFALSHPGGSLGRKLLLKVDDVMHQGDDLPIVNDDICITDALYEISKKGLGMTAVVD
HASKLVGIFTDGDLRRVIDADVNLRTTSIAHVMTKNCVTSPAGILAAQALQIMDEKSING
LIVVNEKHQPIGALNMLDMVKAGVI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatcacactcaatttcgtcaatggggccgtaaagtcattgatatagaaaaagct
gccttagataatttatatcaatatgtagactcggttgaatttgaccaagcatgtcaattg
atcatgcagtgcaaaggtaaagtgattgtcatgggaatgggcaaatctggccatattggt
aacaaaatatccgcgacctttgccagtactggcacaccggcattttttgttcatccagga
gaagccagtcatggcgatttgggcgcattagccaaaaatgacattgtactcgccatttcc
aactctggtgagtcaagcgaaatactaacgttaatgcctgttatccaacgcatgggtgta
cctgtgattgctgtaactggcaaaccagactctaatatggcacgtttatccaaaatccat
ttatgcattcaagtgcaagaagaagcatgtccattaggattagcccccacctccagcacc
acagctacattggctatgggcgatgcattagccattgctttattacaagcaaaaggtttt
actcgtgatgactttgccttatcacacccaggtggctctcttggaagaaaattattacta
aaagtcgatgatgtcatgcatcaaggcgatgatttaccgatcgtcaatgatgatatttgt
attactgacgcactttatgaaatatctaaaaaaggccttggcatgacggctgtagtcgac
catgccagtaaactcgtaggcatttttaccgatggcgatttacgccgggttattgatgca
gacgtgaaccttcgaaccacttctattgctcacgtaatgactaaaaactgtgttaccagc
cctgctggtattttagcagcacaagcactgcaaatcatggatgaaaagagcatcaacgga
ctgatagtcgttaatgaaaaacatcaaccgatcggagcattaaacatgctcgatatggtt
aaagctggagtcatttaa
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