Shewanella frigidimarina: Sfri_3952
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Entry
Sfri_3952 CDS
T00395
Name
(GenBank) histidine ammonia-lyase
KO
K01745
histidine ammonia-lyase [EC:
4.3.1.3
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00340
Histidine metabolism
sfr01100
Metabolic pathways
Module
sfr_M00045
Histidine degradation, histidine => N-formiminoglutamate => glutamate
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00340 Histidine metabolism
Sfri_3952
Enzymes [BR:
sfr01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.3 histidine ammonia-lyase
Sfri_3952
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Gene cluster
GFIT
Motif
Pfam:
Lyase_aromatic
Motif
Other DBs
NCBI-ProteinID:
ABI73777
UniProt:
Q07W37
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All DBs
Position
complement(4715257..4716795)
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AA seq
512 aa
AA seq
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MSTYSFELIPGTLTLAQTRAISRNSVKLTLAKEAIKDINQSAEIVQQVLREGRTVYGINT
GFGLLANTKIVPEDLQLLQRSIVLSHAAGIGKYMQDATVRLMMVLKINSLSRGFSGIRLE
VIEFLIQLVNAGVYPCVPEKGSVGASGDLAPLAHMCLPLLGEGEMSYQGLIISAVEGLEI
AGLKPIELAAKEGLALLNGTQASTALALEGLFNAEDLFAASSIIGAMSVEAAMGSRSPFD
ARIHAARGQKGQIDSAAIFRHLLTNESEISLSHTNCEKVQDPYSLRCQPQVLGACLTQIR
QAAEVLGAEANGVTDNPLVFQDTGDIISGGNFHAEPVAMAADNLAIAIAEMGSISERRMA
LLIDSSLSKLPPFLVDNGGVNSGFMIAQVTAAALASENKTYAHPASVDSLPTSANQEDHV
SMATFAARRLRYMSENTRGVLAIELLAAAQGLDFRKPLQPSAAVAMAKAELREIVTFYDK
DRYFSPDIENSVDLLYSASFNRLLPQGMLPSF
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttattcatttgaacttattccaggtacgctgacattagcgcagactcgtgcg
atcagccgtaatagtgtcaagctgacccttgcgaaagaagcgattaaagacattaatcaa
agtgctgaaatcgtccagcaagtattacgtgaaggccgtactgtttacggtatcaatact
ggctttggcttgttagccaacactaaaattgttccagaagatctgcaattattgcaacgc
tctattgtattgtcccacgcagctggcattggtaaatacatgcaagatgctaccgtgcgc
ttaatgatggttttaaaaattaactcattaagccgcggtttttcaggtattcgtttagag
gttatcgagtttctcattcagctagtgaatgccggagtgtatccgtgtgtgccagaaaaa
ggctcagtcggggcatcgggtgacttagcgccattagctcacatgtgtttacctttgtta
ggtgaaggcgaaatgagctatcaggggctgattatctcagcagtggaaggtcttgagatt
gctgggctaaaacctattgaattagcagccaaagaagggttagcgttactgaatggtacg
caagcctcaacagcgctggcgcttgaaggtttgtttaatgcagaagacttgtttgccgcc
agttcaattattggcgccatgagtgttgaagccgctatgggcagtcgtagtccgtttgat
gcgcgcattcatgctgcgcgtggacaaaaaggccaaattgactcagcagccattttccgt
catttgctcactaacgaatcggaaattagcctaagtcataccaattgcgaaaaagtgcaa
gacccatattcactgcgctgtcagccacaggtattaggtgcgtgcttaacccaaattcgt
caagcagcagaagtgcttggcgctgaggcaaacggcgttactgataatccattggtgttc
caagatacgggcgatattatttcgggcggtaacttccatgccgaacccgttgcgatggcg
gctgataacctcgcgattgcgattgctgaaatgggctcaatttcggagcgtagaatggcg
ttgttgattgattctagtttgtctaagctaccgccatttttagtggataacggtggggta
aattctggctttatgattgctcaggtcaccgcggctgcacttgcatcggaaaacaaaacc
tatgcacatcctgcctcggtagacagtttgccgacatcggcaaaccaagaagatcatgtg
tcgatggcgacatttgccgcacgacgtttacgctacatgagcgaaaatacccgtggagta
ttggctattgagttgttagctgctgcgcaagggttagactttagaaagcctttgcaacca
agcgccgccgtagcaatggccaaagccgagcttcgtgaaatagtgacgttttatgataag
gaccgttatttttcacctgatattgagaactcggtcgacttgttgtatagcgccagtttt
aaccgattgctaccgcagggcatgttaccgagtttttaa
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