Shigella flexneri Shi06HN006 (serotype Yv): SFyv_0804
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Entry
SFyv_0804 CDS
T03315
Name
(GenBank) SucA
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00020
Citrate cycle (TCA cycle)
sfs00785
Lipoic acid metabolism
sfs01100
Metabolic pathways
sfs01110
Biosynthesis of secondary metabolites
sfs01120
Microbial metabolism in diverse environments
sfs01200
Carbon metabolism
sfs01210
2-Oxocarboxylic acid metabolism
Module
sfs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sfs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SFyv_0804
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SFyv_0804
Enzymes [BR:
sfs01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SFyv_0804
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GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AIL39452
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Position
complement(593671..596472)
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AA seq
933 aa
AA seq
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MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHS
QTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKV
ADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELISALKQTYCGPIGAEYMHITSTEE
KRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLK
EMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMG
FSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPNSNKVLPITIHGDAAV
TGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIF
HVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKH
PTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHE
WDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLA
YATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLS
EEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPH
GYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKS
LLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDV
AIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLR
YAGRPASASPAVGYMSVHQKQQQDLVNDALNVE
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagcgctttgaaagcctggttggactcttcttacctctctggcgcaaaccag
agctggatagaacagctctatgaagacttcttaaccgatcctgactcggttgacgctaac
tggcgttcgacgttccagcagttacctggtacgggagtcaaaccggatcaattccactct
caaacgcgtgaatatttccgccgcctggcgaaagacgcttcacgttactcttcaacgatc
tccgaccctgacaccaatgtgaagcaggttaaagtcctgcagctcattaacgcataccgc
ttccgtggtcaccagcatgcgaatctagatccgctgggactgtggcagcaagataaagtg
gccgatctggatccgtctttccacgatctgaccgaagcagacttccaggaaaccttcaac
gtcggttcatttgccagcggcaaagaaaccatgaaactcggcgagcttatttccgccctc
aagcaaacctactgcggcccgattggtgccgagtatatgcacatcaccagcaccgaagaa
aaacgctggatccaacagcgtatcgagtctggtcgcgcgactttcaatagcgaagagaaa
aaacgcttcttaagcgaactgaccgccgctgaaggccttgagcgttacctcggcgcaaaa
ttccctggcgcaaaacgcttctcgctggaaggcggtgacgcgttaatcccgatgcttaaa
gagatgatccgccacgctggcaacagcggcacccgcgaagtggttctcgggatggcgcac
cgtggtcgtctgaacgtgctggtgaacgtgctgggtaaaaaaccgcaagacttgttcgac
gagttcgccggtaaacataaagaacacctcggcacaggcgacgtgaaataccacatgggc
ttctcgtctgacttccagaccgatggcggcctggtgcacctggcgctggcgtttaacccg
tctcaccttgagattgtaagcccggtcgttatcggctctgttcgtgcccgtctggacaga
cttgatgagccgaacagcaacaaagtgctgccaatcaccatccacggtgacgccgcagtg
accgggcagggcgtggttcaggaaactctgaacatgtcgaaagcgcgtggttatgaagtt
ggcggtacggtacgtatcgttatcaacaaccaggttggtttcaccacctctaacccgctg
gatgcccgttctacaccgtactgtactgatatcggtaagatggttcaggcaccgattttc
cacgttaacgcggatgatccggaagccgttgcctttgtgacccgtctggcgctcgatttc
cgtaacacctttaaacgtgatgtcttcatcgacctggtatgctaccgccgtcacggccac
aacgaagccgacgagccgagcgcaacccagccactgatgtatcagaaaatcaaaaaacat
ccgacaccgcgcaaaatctacgctgacaagctggagcaggaaaaagtggcgacgctggaa
gatgccaccgagatggttaacctgtaccgcgatgcgctggatgctggcgattgcgtagtg
gcagagtggcgtccgatgaacatgcactctttcacctggtcgccgtacctcaaccacgaa
tgggacgaagagtacccgaacaaagttgagatgaagcgcctgcaggaactggctaaacgt
atcagtacggtaccagaagcagttgaaatgcagtctcgcgttgccaagatttatggcgat
cgccaggcgatggcagccggtgagaaactgttcgactggggcggtgcggaaaacctcgct
tacgccacgctggttgatgaaggcattccggttcgcctgtcgggtgaagactccggtcgc
ggtaccttcttccaccgccacgcggtgatccacaaccagtctaacggttccacttacacg
ccgctgcaacacatccataacggtcagggcgcgttccgtgtctgggactccgtactgtca
gaagaagccgtgctggcgtttgaatatggttatgccaccgcagaaccacgcaccctgacc
atctgggaagcgcagttcggtgacttcgccaacggtgcgcaggtggttatcgaccagttc
atctcctctggcgagcagaaatggggccggatgtgtggtctggtgatgttgctgccgcac
ggttacgaagggcaggggccggagcactcctccgcgcgtctggaacgttatctgcaactt
tgtgctgagcaaaacatgcaggtttgcgtaccgtctaccccggcacaggtttaccacatg
ctgcgtcgtcaggcgctgcgcgggatgcgtcgtccgctggtcgtgatgtcgccgaaatcc
ctgctgcgtcatccgctggcggtttccagcctcgaagaactggcgaacggcaccttcctg
ccagccatcggtgaaatcgacgagcttgatccgaagggcgtgaagcgcgtagtgatgtgt
tctggtaaggtttattacgacctgctggaacagcgtcgtaagaacaatcaacacgatgtc
gccattgtgcgtatcgagcaactctacccgttcccgcataaagcgatgcaggaagtgttg
cagcagtttgctcacgtcaaggattttgtctggtgccaggaagagccgctcaaccagggc
gcatggtactgcagccagcatcatttccgtgaagtgattccgtttggggcttctctgcgt
tatgcaggccgcccggcctccgcctctccggcggtagggtatatgtccgttcaccagaaa
cagcaacaagatctggttaatgacgcgctgaacgtcgaataa
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