Shigella flexneri Shi06HN006 (serotype Yv): SFyv_0870
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Entry
SFyv_0870 CDS
T03315
Name
(GenBank) Glutamine--tRNA ligase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00970
Aminoacyl-tRNA biosynthesis
sfs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SFyv_0870
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfs01007
]
SFyv_0870
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfs03016
]
SFyv_0870
Enzymes [BR:
sfs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
SFyv_0870
Amino acid related enzymes [BR:
sfs01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SFyv_0870
Transfer RNA biogenesis [BR:
sfs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SFyv_0870
Prokaryotic type
Other AARSs
SFyv_0870
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
AIL39503
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Position
complement(642200..643864)
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AA seq
554 aa
AA seq
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MSEAEARPTNFIRQIIDEDLASGKHITVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKG
QCNLRFDDTNPVKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLA
YVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMA
SPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRL
YDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRR
GYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGE
GEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA
ERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVP
NPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN
RTVGLRDTWAKVGE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggcagaagcccgcccgactaactttatccgtcagatcatcgatgaagatctg
gccagtggtaagcacatcacagtacacacccgtttcccgccggagccgaatggctatctg
catattggccatgcgaaatctatctgcctgaacttcgggatcgcccaggactataaaggc
cagtgcaacctgcgtttcgacgacactaacccggtaaaagaagatatcgagtatgtcgat
tcgatcaaaaacgacgtagagtggttaggttttcactggtctggtaacgtccgttactcc
tccgattattttgatcagctccacgcctatgcgatcgaactgatcaataaaggcctggcg
tacgttgatgaactgacaccggaacagatccgcgaataccgcggtaccctgacgcagccg
ggtaaaaacagcccgtaccgcgaccgcagcgttgaagagaacttggcgctgttcgaaaaa
atgcgtgccggtggttttgaagaaggtaaagcctgcctgcgtgcgaaaatcgacatggcg
tcgccatttatcgtaatgcgcgatccggtgctgtaccgcattaaatttgctgaacaccac
cagactggcaacaagtggtgcatctacccgatgtacgacttcacccattgcatcagcgat
gcgctggaaggtattacgcactctctgtgtacgcttgagttccaggacaaccgtcgtctg
tacgactgggtactggataacatcaccattcctgttcatccgcgccagtacgaattctcg
cgcctgaatctggaatacactgtgatgtccaagcgtaagctgaacctgctggtgaccgac
aagcacgttgaaggctgggatgacccgcgtatgccgaccatttccggtctgcgtcgtcgt
ggttacactgcggcttctattcgtgagttctgcaaacgcatcggcgtgaccaagcaggac
aacaccattgagatggcgtcgctggaatcctgcatccgtgaagatctcaacgaaaatgcg
ccgcgcgcaatggcggttatcgatccggtgaaactggttatcgaaaactatcagggcgaa
ggcgaaatggtcaccatgccgaaccatccgaacaaaccggaaatggggagccgtcaggtg
ccgtttagcggtgaaatttggatcgatcgcgccgatttccgcgaagaagctaacaagcag
tacaaacgtctggtgctgggtaaagaagtgcgtctgcgtaatgcttacgtcattaaggct
gaacgcgtggagaaagatgccgaaggtaatatcaccaccatcttctgtacttatgacgcc
gacaccttaagcaaagatccggcagatggtcgtaaagtcaaaggtgttattcactgggtg
agcgcggcacatgcgctgccggttgaaatccgtttgtatgatcgtctgttcagcgtgcct
aacccaggtgctgcggatgatttcctgtcggtgattaacccggaatcgctggtgatcaaa
cagggctttgctgaaccgtcgctgaaagatgcggttgcgggtaaagcattccagtttgag
cgtgaaggttacttctgcctcgacagccgccattccacggccgaaaaaccggtatttaac
cgcaccgttgggctgcgtgatacctgggcgaaagtaggcgagtaa
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