Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3270
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Entry
SFyv_3270 CDS
T03315
Name
(GenBank) YeiN
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00240
Pyrimidine metabolism
sfs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SFyv_3270
Enzymes [BR:
sfs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
SFyv_3270
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AIL41396
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Position
complement(2307053..2307991)
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AA seq
312 aa
AA seq
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MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGA
VPATIAIIGGVMKVGLSKEKIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIA
ALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLET
FGVPLIGYQTKALPAFFCRTSSFDVSIRLDSASEIARAMAVKWQSGLNGGLVVANPIPEQ
FAMPEESINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTSGDSLKSNIQLVFNNAILA
SEIAKEYQRLAG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattaaaaatttcccctgaattattacaaatttctccggaagtgcaggacgct
ttaaaaaacaaaaaaccggttgtggcgctggaatcgaccattatttctcacgggatgccg
ttcccacaaaatgcccagaccgcaattgaagtagaagaaactattcgtaaacagggcgca
gtacctgccactatcgccattattggcggcgtgatgaaagtgggtttaagcaaagaaaaa
attgaattactgggtcgtgaagggcataacgtgaccaaagttagtcgtcgcgatttacct
tttgttgttgccgccggaaaaaatggcgcaaccactgtggcttcaacgatgattattgcg
gcgcttgccggaattaaagtatttgccaccgggggaattggtggtgtgcatcgcggggcg
gaacataccttcgatatttctgccgatttgcaagaactggcaaatactaatgtcaccgtt
gtttgtgccggggcgaaatctattctcgatttaggattaaccactgagtatttagaaacc
ttcggtgtgccgttaattggctatcagactaaagcgctgcctgcgtttttctgccgtacc
agctcgtttgacgtcagcattcgtctcgacagcgccagtgaaattgcccgtgcaatggcg
gtgaaatggcaaagcgggctgaacggtggcctcgtggtagcgaacccgatcccggaacag
tttgcgatgccggaggaatctatcaatgcagccatagatcaagccgtcgccgaagccgaa
gagcagggcgttattggtaaagaaagtacaccgttcctgctggcgcgcgttgctgagctg
accagcggtgacagcctgaaatccaatatccagctggtgttcaacaacgccattctggcg
agtgaaattgccaaagaataccagcgtctcgcgggttaa
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