Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3290
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Entry
SFyv_3290 CDS
T03315
Name
(GenBank) protein rtn
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SFyv_3290
Enzymes [BR:
sfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SFyv_3290
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GFIT
Motif
Pfam:
EAL
CSS-motif
CSS_CxxC
Motif
Other DBs
NCBI-ProteinID:
AIL41411
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Position
2321190..2322683
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AA seq
497 aa
AA seq
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MIAILVSCLQFLVAWHKHEVKYDTLIIDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANP
ELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMV
PNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRL
MNVNELTDMPVHETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVR
MRPDREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ
KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH
FQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG
FINAIGTETITSPVLDAVLTLAKRLNMLTVTEGVETPEQARWLSERGVNFMQGYWISHPL
PLDDFVRWLKKPYTPQW
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgatactggttagctgccttcagtttttagtggcctggcataagcacgaagtc
aaatacgacacactgattatcgacgtacaaaagtatctcgatacctattttgccgacctg
aaatccactactgaccggcttcagccgctgaccttagatacctgccagcaggctaacccc
gaactgaccgctcgcgcggcgtttagcatgaatgtccgtacgtttgtgctggtgaaagat
aaaaaaacattctgttcatctgcgactggtgagatggacattccactcaatgaattgatt
ccggcgctcgacattaataaaaacgtcgatatggcgatcttacccggcacgccgatggtg
ccgaacaaacccgcaatcgtcatctggtatcgcaaccctttgctgaaaaatagcggtgtg
tttgccgctctgaatctcaacctgacgccttctctcttttatagttcacggcaggaagat
tacgatggcgtcgccctcattattggcaatactgcgctatctaccttttcttcacgtttg
atgaacgttaatgaattaaccgacatgccggtccatgaaactaaaattgcgggcattcct
ctgaccgttcggctttatgcggatgactggacatggaacgatgtgtggtacgcattttta
ctgggcggcatgagtggaactgtcgttggcctgctttgctattacctgatgagcgtacgt
atgcgccccgacagagaaatcatgaccgccatcaagcgcgaacaattttacgtggcgtat
caaccggtggtggatacacaagctttgcgggtaacgggcctggaagtactgctacgctgg
cggcatcctgtagcgggagaaattcccccggatgccttcattaactttgccgaatcgcaa
aagatgattgtgccgctgactcagcacctgtttgagttaattgcccgcgatgccgcagaa
ttagaaaaagtactgccggtaggcgtcaaatttggcattaacattgcgccggaccatctg
cacagcgaaagctttaaagcagatatccagaaactgctcacttccctgcccgcacaccat
ttccagattgtgctggaaattaccgagcgcgatatgctgaaagagcaagaagccacacaa
ctcttcgcctggctgcactcggtcggcgtagaaattgctattgatgacttcggcaccggg
cacagcgcgcttatctatcttgagcgttttacgctcgattatctgaaaattgaccgtgga
tttatcaacgccatcggtacggaaacgatcacttcacccgtacttgacgcggtgctgacg
ctggcgaaacgtctcaatatgctgacagttactgaaggggtcgaaacgccggaacaagcg
cgatggctaagcgaacgcggcgttaatttcatgcaaggctactggattagtcacccgtta
ccgctggacgattttgttcgctggctgaagaaaccgtatacgccgcagtggtaa
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