KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_00361
Entry
NCTC1_00361       CDS       T03751                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase,Riboflavin biosynthesis protein RibD,bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase,Pyrimidine deaminase,riboflavin biosynthesis protein RibD,RibD C-terminal domain
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft00740  Riboflavin metabolism
sft01100  Metabolic pathways
sft01110  Biosynthesis of secondary metabolites
sft01240  Biosynthesis of cofactors
sft02024  Quorum sensing
Module
sft_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sft00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NCTC1_00361 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NCTC1_00361 (ribD)
Enzymes [BR:sft01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NCTC1_00361 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NCTC1_00361 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CDX05642
UniProt: A0A9P2IWQ7
LinkDB
Position
1:362003..363106
AA seq 367 aa
MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAG
EKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGI
DVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDV
QRQRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPVRIVIDSQNRVTP
EHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWVEA
GPTLAGVLLQAGLVDELIVYIAPKLLGSDARGLCSLPGLEKLADAPQFKFKEIRHVGPDV
CLHLVGA
NT seq 1104 nt   +upstreamnt  +downstreamnt
gtgcaggacgagtattacatggcgcgggcgctaaagctggcgcaacgaggacgttttacc
acccaccccaacccgaatgtcgggtgcgtcattgtcaaagatggcgaaattgtcggtgaa
ggttaccaccaacgagcgggtgaaccacatgccgaagtacacgcgttgcgtatggcgggt
gaaaaagccaaaggcgcaacggcgtatgtgacactcgaaccctgtagccatcatggccgt
acgccaccgtgctgtgacgcactcatcgccgctggcgtagcgcgcgtggtcgcagcgatg
caagatcctaacccgcaggtcgctgggcgtggactttaccgtctgcaacaggctggcatt
gacgtcagccacgggctgatgatgagtgaagccgagcaattgaataaaggctttctcaag
cggatgcgcaccggctttccttatattcagttaaaacttggcgcatcgcttgatggccgc
acggcgatggcgagcggcgaaagccagtggatcacttcgcctcaggcgcggcgcgacgta
caacgacagcgcgcacaaagtcatgccattttaaccagcagcgccacggtgctggcggat
gatccagccttaacagtgcgttggtctgaactggatgaacaaactcaggcgctctacccg
caacaaaatctccgccagccagtacgtattgtgattgatagccaaaatcgcgtgacgccg
gaacatcgcattgtgcagcagcccggcgaaacctggttcgcgcgtacgcaggaagattct
cgtgagtggccggaaacggtgcgtaccttgctgattccagagcataaaggtcatctggat
ctggttgtactgatgatgcaactgggtaaacagcagattaacagcatctgggtggaagcg
gggccaacgctcgctggcgtattgctacaggcgggtttagtcgatgagctgattgtctat
atcgcacctaaactattaggcagcgacgcccgtggattatgctcgctgccagggcttgag
aaattagccgacgccccccaatttaaattcaaagagatacgtcatgtaggcccggatgtt
tgcctgcatttagtgggtgcatga

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