Shigella flexneri 8401 (serotype 5b): SFV_0388
Help
Entry
SFV_0388 CDS
T00377
Symbol
yajK
Name
(GenBank) putative oxidoreductase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00730
Thiamine metabolism
sfv01100
Metabolic pathways
sfv01240
Biosynthesis of cofactors
sfv04122
Sulfur relay system
Module
sfv_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SFV_0388 (yajK)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SFV_0388 (yajK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfv03016
]
SFV_0388 (yajK)
Enzymes [BR:
sfv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
SFV_0388 (yajK)
Transfer RNA biogenesis [BR:
sfv03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SFV_0388 (yajK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
ABF02660
UniProt:
Q0T7G6
LinkDB
All DBs
Position
405020..406468
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQR
LTIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFS
SIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKI
EAEEEKFDFSILDKVVEEANNVDIREIAQQTEQEVVEVETVNGFGPNDVILDIRSVDEQE
DKPLKVEGIDVVSLPFYKLSTKFGDLDQNKTWLLWCERGVMSRLQALYLREQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgcttg
cgctttataaaaatccttaccgggaacattcgtaacgttttaaagcactatgatgagacg
ctcgctgtcgtccgccactgggataacatcgaagttcgcgcgaaagatgaaaaccagcgt
ctgactattcgcgacgccctgacccgtattccgggtatccaccatattctcgaagtcgaa
gacgtgccgtttaccgacatgcacgatatttttgagaaagcgttggttcagtatcgcgat
cagctggaaggcaaaaccttctgcgtacgcgtgaagcgccgtggcaaacatgattttagc
tcgattgatgtggaacgttacgtcggcggcggtttaaatcagcatattgaatccgcgcgc
gtgaagctgactaacccggatgtaactgttcatctggaagtggaagacgatcgcctcctg
ctgattaaaggtcgctacgaaggtattggtggtttcccgattggcacccaggaagatgtg
ctgtcgctcatttccggtggtttcgactccggtgtttccagttatatgttgatgcgtcgc
ggctgccgcgtgcattactgcttctttaacctcggcggcgcagcgcatgaaattggcgtg
cgtcaggtggcgcattatctgtggaaccgctttggcagctcccaccgcgtgcgttttgtc
gccattaatttcgaaccggttgtcggggaaattctcgagaaaatcgacgacggtcagatg
ggcgttatcctcaaacgtatgatggtgcgtgccgcatctaaagtggctgaacgttacggc
gtacaggcgctggtcaccggcgaagcgctcggccaggtgtccagtcagacgctgaccaac
ctgcgcctgattgataacgtctctgacacgctgatcctgcgtccgctgatttcttacgac
aaagagcacatcatcaacctggctcgccagattggcaccgaagactttgctcgcacgatg
ccggaatattgtggcgtgatctccaaaagcccgacggtgaaagcggttaaatcgaagatt
gaagcggaagaagagaagttcgacttcagtattctcgataaagtggttgaggaagcgaat
aacgttgatatccgcgaaatcgcccagcagaccgagcaggaagtggtggaagtggaaacc
gtcaacggcttcggcccgaacgacgtgattctcgatatccgttctgtcgatgaacaggaa
gataagccactgaaagtcgaagggattgatgtggtttctctgccgttctataaactgagc
accaaatttggcgatctcgaccagaacaaaacctggctgctgtggtgtgagcgcggggtg
atgagccgtctgcaggcgctctatctgcgcgagcaaggctttaacaatgtgaaggtatat
cgcccgtaa
DBGET
integrated database retrieval system
