Serratia fonticola DSM 4576: WN53_04480
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Entry
WN53_04480 CDS
T04030
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sfw
Serratia fonticola DSM 4576
Pathway
sfw00250
Alanine, aspartate and glutamate metabolism
sfw00310
Lysine degradation
sfw00350
Tyrosine metabolism
sfw00650
Butanoate metabolism
sfw00760
Nicotinate and nicotinamide metabolism
sfw01100
Metabolic pathways
sfw01120
Microbial metabolism in diverse environments
Module
sfw_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
WN53_04480 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
WN53_04480 (gabD)
00310 Lysine degradation
WN53_04480 (gabD)
00350 Tyrosine metabolism
WN53_04480 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
WN53_04480 (gabD)
Enzymes [BR:
sfw01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
WN53_04480 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
WN53_04480 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
WN53_04480 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AKG68434
UniProt:
A0A0F7H7H4
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Position
complement(1035340..1036794)
Genome browser
AA seq
484 aa
AA seq
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MKLQNPDLLRSQCLINGEWCDARSGKREAVINPANGVELTTVPLVSAEETQQAINAAQQA
QIGWKQQTAKQRSVLLLAWADKIMAAQEDLAQLMTAEQGKSLAEARGEVAYAASFITWFA
EEAKRVDGAVLQAPQASQRLVVVKQPIGVCAAITPWNFPAAMITRKAAPALAAGCTMIVK
PAEQTPLTALALAKLAQDAGIPAGVLQVVTGEAAQVGKVLCDSPVVRKLSFTGSTEVGRI
LMAQCAPTIKKLSLELGGNAPVIVFDDANLDAAVAGIMASKFRNSGQTCVCANRIYVQDG
IYDRLVDKLVAAVEQLKVGDGTQEGTTQGPLIDEAAIEKVQSHIDDALIKGAQIATGGQP
HALGRTFFQPTVVTGVTQQMRFAKEETFGPVAPLFRFHDEAEAIAMANDTEFGLAAYLFT
QNAARQWRVPEALEYGMVGINTGLISNEVAPFGGIKQSGLGREGSRYGIEEYLELKYLCI
DVSC
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcaaaatcccgatctgctgcgtagccaatgcttgattaacggcgagtggtgc
gatgcgcgcagcggcaaacgtgaagccgtgatcaacccggccaacggtgtggagctgaca
acggtgcctttggtgagtgcagaggaaactcagcaggcaattaacgctgcgcagcaggca
caaatcggctggaagcaacagaccgccaagcagcgttccgtattgctgctggcctgggcc
gataaaatcatggcggctcaggaagatctggcgcagctgatgaccgctgagcagggtaaa
tcgctggcggaagcgcgtggcgaagtggcctatgccgcctcgtttattacctggttcgcc
gaggaagccaagcgtgtagacggtgccgtattacaggcaccacaggcttcacaacgtctg
gtcgtggtgaaacagccaatcggcgtctgtgcggcgatcacgccgtggaacttcccggca
gcgatgatcacccgtaaggcagcacctgcgctggccgcaggctgcaccatgatcgtcaaa
ccggctgagcaaacgccgctgaccgcattggcattggccaaactggcgcaggatgccggt
attcccgcaggcgtattgcaggtggtaaccggcgaagcggcacaggtgggtaaagtgctg
tgcgatagcccggtagtgcgcaagctgagctttaccggatcgaccgaagttgggcgcatc
ctgatggcccaatgtgcgccaaccattaaaaagctttcgttggaactgggcggcaacgcg
ccggtgatcgtgtttgacgacgcgaatctggacgcggccgtcgccgggatcatggcctcc
aaattccgcaacagcgggcagacctgcgtttgcgccaaccgcatctacgttcaggacggt
atctacgatcgcctggtggataagctggtggccgcggttgagcaactgaaagtcggtgat
ggcacacaggaagggacaacgcaggggccgctgatcgatgaggccgcgatagagaaagtg
cagagccacattgatgatgcgctgatcaaaggggcgcagatcgccaccggcgggcagccg
catgcgctgggccgtaccttcttccagccaacggtggttaccggtgtgacccagcagatg
cgctttgccaaagaagaaacctttggcccggtggcgccgctgttccgtttccatgacgaa
gcggaagctatcgcgatggccaatgataccgaatttggtctggctgcttacctgtttacg
caaaacgctgctcgtcaatggcgggtgccggaggcgttggaatacggcatggtgggcatc
aataccggtttgatctccaacgaggtggcgcctttcggcggtatcaaacagtccgggctg
ggtcgcgaaggctctcgctacggcattgaagagtatctggaactgaaatatctgtgtatt
gacgtgagctgttaa
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