Streptomyces fagopyri: GFH48_21890
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Entry
GFH48_21890 CDS
T06986
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
sfy
Streptomyces fagopyri
Pathway
sfy00190
Oxidative phosphorylation
sfy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
GFH48_21890
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFH48_21890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfy03019
]
GFH48_21890
Enzymes [BR:
sfy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
GFH48_21890
Messenger RNA biogenesis [BR:
sfy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GFH48_21890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QFZ78883
UniProt:
A0A5Q0LNZ7
LinkDB
All DBs
Position
complement(5013290..5015593)
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AA seq
767 aa
AA seq
DB search
MRLAALPPARSDAPVSRPARKNGAMNQPSAQAQVQHPQPSVGSIAAHRPHTVAANVSDLE
PDLDADLDAYEDTVQDGIQLPQGRFLDRERSWLAFNERVLELAEDPSTPLLERAKFLAIF
ASNLDEFFMVRVAGLKRRIATGVATKSASGLQPREVLEMIWARSRELMARHAACYQEDVA
PALAEEGIHLVRWSELTEKEQARLFTLFRHQIFPVLTPLAVDPAHPFPYISGLSLNLAVV
VRNPVSGHRHFARVKVPPLLSRFLEASPDRYVPIEDVIAAHLEELFPGMEVLEHHTFRLT
RNEDLEVEEDDTENLLQALEKELMRRRFGPPVRLEVEESIDRYVLDLLVRELKISEAEVY
PLPGPLDLTGLFGIGALDRPELKYPKFIAGTHRDLAEVESASAPDIFAALRERDVLLHHP
YDSFSTSVQAFLEQAASDPDVLAIKQTLYRTSGDSPIVDALIDAAESGKQVLVLVEIKAR
FDEQANIKWARKLEESGCHVVYGLVGLKTHCKLSLVVRQEGDTLRRYSHVGTGNYHPKTA
RLYEDLGLLTADPQVGADLSDLFNRLSGYSRRETYRRLLVAPKSLRDGLIARINKEVQHH
NAGRPAYVRIKCNSMVDEAIIDALYRASQAGVPVDVWVRGICAVRPGVTGLSENIRVRSV
LGRFLEHSRVFAFGNGGEPEVWIGSADMMHRNLDRRIEALVRITDPAHRAALSRLFETGM
SDTTASWHLGPDGEWTRHATDQDGQPLRNVQEMLIDARRRRRGTATP
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atccgcctcgccgcgctgccgcccgcccgctccgacgcgccggtctcgcgtccggcacgg
aagaatggggccatgaaccagcccagcgcccaggcacaggtccagcacccgcagccgtcc
gtcggttccatcgccgcgcaccggccgcacaccgtcgccgccaatgtctccgacctggag
cccgacctcgacgccgacctcgacgcgtacgaggacacggtgcaggacggcatccagctc
ccgcagggccggttcctggaccgggaacgcagctggctggcgttcaacgaacgcgtcctc
gaactcgccgaggacccgagcacacccctcctcgaacgggcgaagttcctggccatcttc
gccagcaacctggacgagttcttcatggtccgggtggccggcctcaagcggcgcatcgcg
accggcgtcgccaccaagtccgcctccggcctccagccgcgcgaggtcctggagatgatc
tgggcccgctcgcgcgaactcatggcccggcacgccgcctgctaccaggaggacgtcgcc
cccgcgctcgcggaggagggcatccacctggtccgctggagcgagctcaccgagaaggaa
caggcccgcctcttcacgctcttccggcaccagatcttcccggtcctgaccccgctcgcg
gtcgaccccgcgcaccccttcccgtacatctccggcctgtccctgaacctggccgtggtc
gtacggaaccccgtcagcggccaccggcacttcgcgcgcgtcaaggtcccgccgctgctc
tcccgcttcctggaggcctccccggaccgctacgtccccatcgaggacgtcatagccgcc
cacctggaggagctcttcccgggcatggaggtgctggagcaccacaccttccgcctcacc
cgcaacgaggacctcgaggtcgaggaggacgacaccgagaaccttctccaggccctggag
aaggaactcatgcggcgccgcttcggaccgccggtgcgcctggaggtcgaggagtccatc
gaccggtacgtcctcgacctgctggtgcgggaactgaagatctccgaggccgaggtgtac
ccgctgccgggcccgctggacctcaccggcctgttcggcatcggcgccctcgaccggccc
gagctgaagtacccgaagttcatcgcgggcacccaccgcgacctcgcggaggtcgagtcg
gcgtccgcgcccgacatcttcgccgccctgcgcgagcgcgacgtcctgctgcaccacccg
tacgactccttctccacctccgtacaggccttcctggagcaggcggcgagcgacccggac
gtcctggcgatcaagcagacgctgtaccggacgtcgggcgactcgcccatcgtcgacgcg
ctgatagacgccgccgagtccggcaagcaggtcctcgtcctcgtcgagatcaaggcacgc
ttcgacgaacaggccaacatcaagtgggccaggaagctggaggagtccggctgccacgtc
gtgtacgggctcgtcgggctgaagacccactgcaagctgtcgctggtggtacggcaggag
ggcgacaccctgcgccgctacagccacgtcggcacgggcaactaccaccccaagaccgcc
cgcctgtacgaggacctcggactgctcaccgccgacccgcaggtcggcgcggacctctcc
gacctcttcaaccggctctccggctactcgcgccgcgagacctaccgccggctcctggtg
gcccccaagtcgctgcgcgacggcctgatcgcgcggatcaacaaggaagtccagcaccac
aacgcaggacgccccgcctacgtccgcatcaagtgcaactcgatggtggacgaggcgatc
atcgacgcgctgtaccgcgcgtcccaggccggagtccccgtcgacgtgtgggtgcgcggc
atctgcgcggtccggcccggcgtcacgggcctgtccgaaaacatacgggtccggtccgtg
ctcggccgcttcctggaacactcacgggtcttcgcgttcggcaacggcggagagcccgag
gtgtggatcggcagcgccgacatgatgcaccgcaacctcgaccggcggatcgaggccctg
gtcaggatcaccgacccggctcaccgggcagccctcagccggctgttcgagaccgggatg
tcggacaccaccgcttcctggcacctgggcccggacggcgaatggacccggcatgcgacc
gaccaggatggccaaccgctgcggaacgtccaggagatgctcatagacgcccggaggcgc
cggcgtggcacagcaacaccttga
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