Stenotrophomonas geniculata: RKE57_12120
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Entry
RKE57_12120 CDS
T09411
Name
(GenBank) MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_12120
01504 Antimicrobial resistance genes [BR:
sgen01504
]
RKE57_12120
Transporters [BR:
sgen02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RKE57_12120
Antimicrobial resistance genes [BR:
sgen01504
]
Gene variants
Tetracycline resistance genes
Transporters
RKE57_12120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Motif
Other DBs
NCBI-ProteinID:
WNF08830
LinkDB
All DBs
Position
complement(2629060..2630256)
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AA seq
398 aa
AA seq
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MHARPVVPGLPALVLAALIGTMAMMSFVAVIGPVVRMLGLSEWHAGLSVTAAGVLWMLAA
RPWGQLSDRIGRKRVLMLAMSAYTVVYIALAVFIDVALQAVPPVLVSVLVLVGARGLIGL
FYAAVPPTAAALIADKAPSGQRAKFLARLGSANALGMVLGPAAAGWLAYTNLSLALYVAA
LLPLLALALLAWRLPATPPVVGASAQRRTPMSRLDARLCLPQLAAFIAMVSVTIAQVTVG
FFAIDRLGLDAATGARMAGIALTAVGVGLILAQALVMKLEVHPRRWIVLGALISGIGFTS
VAGVQQAWQLPAAYALAAFGMGFVFPSFQALAADAVEAHEQGAAAGTVAAAQGLGMVAGP
MLGTLLYRGGPSLPYLLVGALLLLLCALAAAHRMKETP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcacgtcccgtcgttcccggcttgccggcgctggtgttggctgccctgatcggc
accatggcgatgatgtccttcgtcgccgtgatcggcccggtggtccgcatgcttggcctg
tccgagtggcatgccgggctatcggtcaccgctgcaggcgtgctgtggatgctggccgcg
cgcccctggggccagctcagcgaccgcatcggacgcaagcgcgtactgatgctggcgatg
agtgcctacaccgtggtctacatcgcgctggcggtgttcatcgacgtcgccctgcaggca
gtgccgccggtgctggtgtcagtgctggtactggtcggcgcgcgtggcctgatcggcctg
ttctacgcggcggtgcctcctaccgcagccgcgctgatcgccgacaaggcaccctccgga
cagcgtgcaaaattcctcgcccgcttgggcagtgccaacgcgctgggcatggtgctcggc
ccggccgccgcgggctggctggcctatacgaacctgtcgctggcgctgtacgtggccgcg
ctgctgccgttgctggcactggcattgctggcctggcgcctgccggctacaccgcccgtg
gtgggcgcgtccgcacagcgccgcacgccgatgagccgcctcgacgcgcgcctgtgcctg
ccgcagctggcagcgttcatcgccatggtctcggtgactatcgcgcaggtcacggtcggc
ttcttcgcaattgatcgcctgggtctggatgcggcgaccggcgcgcgcatggccggcatt
gcactcaccgccgttggcgtcggcctgatcctggcgcaggcgctggtgatgaagctggag
gtgcatccacgtcgctggatcgtcctcggcgctctcatttccggcatcggcttcacttcg
gtggcgggcgtgcagcaggcctggcaattgcctgcggcgtatgcgctggctgcgttcggc
atgggcttcgtattcccctcgttccaggcgctggccgccgatgcggtagaggcgcacgag
cagggcgccgccgcaggcaccgtggcggccgcgcaagggctgggcatggtggccgggccg
atgctcggcacgctgttgtatcgcggcgggccaagcctgccttacctgctggtgggcgcg
ctgctgctgttgctgtgcgcgctggccgcagcgcatcggatgaaggagaccccatga
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