Sinocyclocheilus grahami (golden-line barbel): 107551003
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Entry
107551003 CDS
T04918
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107551003 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107551003 (polr1a)
Enzymes [BR:
sgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107551003 (polr1a)
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107551003 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
BUD22
Motif
Other DBs
NCBI-GeneID:
107551003
NCBI-ProteinID:
XP_016087965
LinkDB
All DBs
Position
Unknown
AA seq
1511 aa
AA seq
DB search
MLFSKETPWRRLEGMSFGLFSSDEIRKLSVKSITNSQLLDNVGNAAANGLYDLALGPADN
KEICSTCMQDYTSCPGHFGHVDLPLPVYNPMFFDKLYLLIRGSCLSCHMLKCPRTAVHLL
LGQLKLLDVGAMKEVYELETVLNQLVEANAQPSGIEIQEALEAFITPILKASEDQQHSAP
IKHICEKKSSLINSFWRVYMGPRKCPNCRASRVTVRREHNSKLIVTHGSSTASTEKDDDS
LITKRGFLTPSLAREHVIKLWEKEGFFLKHLFSGFDMNNSEKGFSPEVFFLELLVVPPCR
YRPVNRLGDQMFTNGQTVNLQAVLKDNFMIQKLLALIAAEKTNATEEMEQSSESAEISQI
DQSFLTGIQGLTLTDKLYNMWIRLQSHANIVFDSDMDKLMTEKFPGVRQLLEKKEGLFRK
HMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPSV
HPGASMVINEDGSRTILSSSNLTQREAVAKQLLTPSTGQHRIPMKIVNRHIKNGDVLLLN
RQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTL
VSTDQQYLVPKDGKPLAGLIQDHMVSGANMTIRGCFFTRDQYTALVYRGLTDKIGRVKLL
PPALFKPVPLWTGKQVVSTLLLNVIPENGIPLNLMGKAKIPSKAWVKEPPRAVPGYRPET
MCESQVVIRQGELLLGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTAYLQL
YRGFTLGVEDILVKDGANKQRRKIIRKSVTCGSKALQAAFNLPAAAGVTEARERWQDAHL
NTDQRDFNMVDLKFKEEVNQVNNNINKVCMPLGLHRSFPENNLQLMVQSGAKGSTVNTMQ
ISCLLGQIELEGRRPPLMPSGKSLPCFQPYEPQPRSGGFVTGRFLTGIKPPEFFFHCMAG
REGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQF
LQPQQFPFIKDNYEVIRKSKCLDEVLAKMDTGATFSHFKAIKKWKAKRERVSPRDGAFLL
YSQKKLSKLKSQVENQTLANGREPATLQLLENWRALAESGRMRYLKKTSHCPDPCLTLYR
PDICFGSVSETFDSIVESYLDQFSVKQEFQTSEITDTDRLRHLLQLKWQRALCDPGEAVG
LLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSIPVLMNK
KALKRVKTLRKKITRVCLSEVLHKVDVIETFRSVEKRSQKSRVFKLSFHFLPPERYQQDK
LLTPNEILNFMEQKFFRILLEAIKKLSAKLAAVNVVDTRKATANDNDRGAGGIADKEDDG
DEDAENNRIVDDEANEGDADATDSKRKEKQEEEVDYESEEGEEAGDELEDGAEDRQEEAD
TQENSEEGSGGSQLADQTQSPDISEELEGASQESMRISTVLQLGSAIEDYKYDTKNGLWC
EVCTNQLILNQ
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttcaaaagaaacgccatggaggcgattagagggcatgtcgtttggtttgttc
tcctccgatgaaataaggaagctgagtgtgaaaagtatcactaattcccagctgctggat
aatgtgggcaatgctgctgcaaacgggctgtatgacctggcgctgggtccagctgataac
aaggagatctgctccacctgcatgcaagactacaccagctgccctggccactttggtcac
gtagatctgccccttcccgtctacaaccctatgttttttgataaattatatttgctcatc
cggggttcatgcctgtcatgccatatgttgaagtgtccgagaacggctgttcatttgctg
ctgggccagctgaagctcctggacgtgggtgcgatgaaggaggtgtatgagctagagacc
gttctcaatcagttggtggaggccaatgctcagccgtctggaatagaaatccaagaagct
ctggaggcgttcattacacccatcctaaaagccagtgaagaccagcagcactctgctcct
atcaaacatatctgtgagaaaaagtccagtctcattaacagtttctggagagtatacatg
ggcccgaggaaatgtccgaattgcagagccagtagagtgactgtgcgcagagaacacaac
agcaaactcatcgtcacacatggatcatccacagcaagcacagaaaaggacgatgattca
ctgattaccaaacgtggattcttgactccaagtttggcacgagaacacgtcatcaaactc
tgggagaaagaaggtttcttcctgaagcatctgttctcagggtttgacatgaataattcg
gagaaaggcttcagtcctgaagttttctttttggagttgcttgtggttcctccgtgcagg
tacaggcctgttaaccgtttgggagaccagatgttcaccaacggacagactgtgaacctg
caggccgtgttaaaggataatttcatgattcagaaactgctcgcactgatcgctgctgag
aagaccaacgctactgaagagatggagcagtccagcgaatccgcagagatcagtcaaata
gatcagagcttcttaacgggcatccaagggctgactctcacagacaagctctataacatg
tggatccgcctgcagagtcacgccaacattgtgtttgacagcgacatggacaaactgatg
actgagaagttcccaggcgtccgtcagctcttggagaagaaagagggtttgttcaggaag
cacatgatgggaaagcgtgtggattacgctgcacgctcggtcatttgtcctgatatgtac
atcggaaccaatgagattggaataccaatggtttttgctaccaagttgacgtacccacag
ccagtgacaccctggaacgtgaaggaactcaggcaggcagtgctgaatggacccagcgtc
caccctggagcctccatggtcattaatgaagacgggtcccgaaccatcctcagcagcagc
aacctgacccagagagaagccgtggccaaacagctcctgacccccagcaccggccagcac
aggatacccatgaagattgtaaatcggcacatcaagaatggggatgtgctgctgctaaac
cgtcagcccactctccacagaccctcaattcaggcccactgtgctcgcatcctgcccgga
gagaaagtgctcagactacattacgccaactgtaaggcctacaatgctgactttgatggt
gacgagatgaacgctcacttccctcagagtgagctgggcagagctgaggcctacacgcta
gtgagcacagaccagcagtacttggtgcctaaagatgggaagccattggccggcctgatt
caggaccacatggtgtctggcgccaatatgaccatccgtggctgttttttcacacgggat
cagtacactgcgctagtctacagaggcctgacggacaagatcggcagagtgaagctcctg
cctcccgcgctctttaaacccgtgcctctctggacaggaaagcaggtggtgtcaaccctt
ttgctgaatgtcatcccagaaaacggcatccctttaaacttgatgggaaaagcaaagatt
cccagtaaagcctgggtgaaggaaccccccagagctgttccaggatacaggcccgaaact
atgtgtgaatctcaggtggtcattcgtcagggagagctcttgctgggagttctagataaa
gctcactatggcagctcagcgtacggtttggtccactgctgctacgagctctacggagga
gagaccagcggcaaactgctcagctgtctggcacgactcttcactgcctacctgcagctt
taccgcggtttcaccttgggtgtggaagacattctagtaaaagatggagccaacaaacag
agaaggaaaattatccgaaagtcagtcacgtgtggctccaaggctctccaggctgcgttt
aacctgcctgcggctgctggagtcactgaagccagagaacgctggcaagacgctcatctg
aacacagaccagagagatttcaacatggtggacctgaagtttaaagaggaggtcaatcaa
gtgaacaacaacatcaacaaggtgtgcatgccgctgggtctccaccgctccttcccagaa
aacaacctacagctgatggtgcagtcaggagccaagggttcgactgttaatactatgcag
atctcctgtttattgggtcagattgagctggagggccgccgaccgccactgatgccttct
gggaagtccctgccctgctttcagccctatgaacctcagccgcgatccggaggattcgta
actggcagattcttgacgggaatcaaacctcctgagttctttttccattgtatggctggt
cgtgaaggtcttgtggacactgctgtcaaaaccagtcgatctggttatttgcagcggtgt
gtgatcaagcatctagaaggtctggtggtccagtatgatctgactgtgcgagacagtgat
ggaagtgtggtccagtttctttacggagaggatgggctggacatccccaagacccagttc
ctacagccgcagcagttccctttcatcaaagacaactacgaggttatcagaaagtcaaag
tgtttggatgaagttctggctaaaatggacacaggggcaacatttagtcactttaaggcc
atcaagaaatggaaagccaaacgtgagcgtgtttcacccagagacggtgccttcctgctc
tactcgcagaagaaactgagcaagttgaagtctcaagtagaaaaccagacactggccaat
gggagagagccagccactctacagctcttggagaattggagagctctggctgagtctggg
cgtatgaggtatttaaagaagacgtctcattgtccagacccgtgtctgactctttaccgg
ccggacatctgcttcggttcagtttctgagacgtttgactccattgttgagtcctacctg
gatcagttcagtgtcaagcaggaatttcagacctctgaaatcactgacacagatagattg
aggcatctcctgcagctgaagtggcagcgcgctctgtgtgaccccggagaggccgtgggt
ctgctggcagctcagagcattggcgaaccatccacacaaatgaccctcaacaccttccac
ttcgccggcagaggagagatgaatgtcaccctgggtataccaagattaagagaaatactc
atggttgcgagctctaacatcaaaacccctatgatgagcattcctgttctgatgaacaag
aaagccttgaaacgtgttaagacgctgcggaagaagataacgcgcgtgtgtttgtcagag
gtgcttcacaaagtggatgtgatagaaactttccgctcggtagagaaacggagccagaag
tcacgagttttcaaactctcattccacttcctgccccctgagcggtaccagcaagacaag
cttctcacccctaatgagattcttaatttcatggagcagaaattctttcgcatactgctg
gaggccattaagaagctgagtgctaaactggcggctgtcaatgtggttgatacacgcaaa
gccacggcaaatgacaatgatcgaggtgccggtggcatcgcggacaaagaggatgatggc
gatgaggatgcagaaaacaacaggattgtggatgatgaggcaaatgaaggtgatgctgat
gccacagattccaagagaaaagaaaaacaagaagaggaggtagactatgagagtgaggag
ggagaggaggccggtgatgagctagaggatggggctgaggacagacaggaagaggcagat
actcaggagaactctgaggaagggtctggtggaagccaactagcagaccagacccagagt
cctgacatctctgaagagctggagggagcttcacaagaatccatgaggatcagcactgtg
cttcagttgggctccgcaattgaggactacaaatatgacaccaaaaatgggctatggtgt
gaggtgtgtacaaatcaattgatcttaaatcagtaa
DBGET
integrated database retrieval system
