Sinocyclocheilus grahami (golden-line barbel): 107553507
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Entry
107553507 CDS
T04918
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107553507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107553507
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107553507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
107553507
NCBI-ProteinID:
XP_016091241
UniProt:
A0A672R803
LinkDB
All DBs
Position
Unknown
AA seq
2354 aa
AA seq
DB search
MAAVLLQLLERSEISKLPKTVLTKLEKYIFEQQCEVDCLKAQQEQYRVDNEQQYFDIEKK
FAESQAQFVSQTQEHQILKEEYCKLEDELKCLREKNKEQVSSYTKLESHQNELSKAKVEL
EAEKRELVRTLERRSQEMEQQSEDLKRINDRLVEVSSEKMQLQLKLDESEATEVSIKYKE
KRMEQEKDLLQNQVTWLKTELKAKSEELLSLSRQKGSEILELQCNLNNKEDEIAHLQDQV
TSLKASNEKLQRQAEEMITKMREAKQQQASLEEKFSNELNANIKLSNLYKGAAADAEAKS
EELSRAVDELHKLLKEAGEAHKALEVKMAELESCKDKEIAELKEKISSQEKELDNANELL
SDAKHRGTTSIFSEEQVTTMSPTAAAIAKIIKPGMKLTEIYTAYVKTQEQLQHEKLENKR
LHKYLDDIVQEMEAKAPILKRQREEYERMQKSVSSLSAKLEQAVTEVHRLQKEADENNKR
ASVLERDNRRFEVQLADMSQQVRVLLIELEEARGNHVIREEDEVCSADVSSTSEVISQHL
VTFRTVEELQQQNQRLLVALRDLSEEKEKDELEGDTMKRHEVEKYLEELQRELEQLKEKR
AQDLQKVDAVARQRDMFRMLLTQATGVTFPQGAGNEELMLTSTPRRSPAITPTAGTPTGL
VATVIESTESVEAKAALKQLQEVFVAYKKEKTESGKALTEQSEKLQDQVTELRSENTKIS
TQLEFTSKRYEMLQDNVEGYRKEIASLNEKSQKQAAAIQQSEQTIHTLNQDLRAAAEKLS
IAESEAENLRKERDMLKMVEIRLTQEKESFQAQRLGQNMLLTNLKSIQATLEHSETETRQ
RLTAQIEKQEREIAQLQKRLENEVEQKHLLARNQDMQLMDVKKQLETQTSQYYRTREQLS
AAQLELNNLKLQMSSKESRLLSPTIRTGLQGSEGDIEALRAQLKQAESKVEELAERLKNT
TASMEQYKAMSLSLEESLDKEKRVTEQVRSSVQSRVEAAQELYKQLEQKLLEADKEKQSL
LEEKSKAVAAVEQELNELKKSLSSLQGEHQSVLERAAVAAAQEQQAILDSQEQAKMAAEA
QDKYEREMLLHAADVEALQATKAQALLAAHLRQQLEEKVQSTSAQLLEARVSWEEQEKIL
KEEQSKLESRCEDLQRQNTLLHEQIQTLSGQMASQLLRATSESPLNVSLTEEGKSQEQLL
EILRFVRREKEIAESRFEVVQGESLRHRLRVEHLERELKDVQESLNAEREKMQVTAKTLA
QHDELMKKTETMNVLMETNKMLREEKKKLEQELQDTQAKVRKLESDILPMQESNAELSEK
SGMLQAEKKLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEREAHLKRIQQLVEETSR
LKAEASRNSGSLTMMQSQVQNLRENLGKVMVERDSLKKDQEAKNLDIQEKLKTIAQVKKI
GRRYKTQYEELKVEYDKLVAAAASAPAQDQEAQQASAQEIQALKESLNQSENRTRELEGH
LENLNRTVGERETEARNTQEQASRLQAELTRLRQELQEKSSQEERLKQQLTEKEERTKKA
IVMAKQKISQLSGVKGQLQKENEELKQQKEELEVRVSALKSQYEGRLSRQERELRDLREQ
QERHGEQRDEPPEQGSSKTQEPQRTTEQRQISLKSTPVAERGSASTSEPPTANIKPTPLA
ATPSKPPAIPGNKSTPRASIKPMITPAPVPTPTPTATVMPTTQVESQEPMQSSEGPLEHV
TVYGSASGSVRSTSPNVQTTLAQPLLTIQQQSQATAFIQPTQQQTQAPAEPSNQEPLAAV
MLPNSQLDWPLSTSTGIWSATASTSSAGAVSASPSSALSKRPREEEQESMSADTQSQDEP
IDTPFCKRVRIHRVGLEEEMLAEDSTEAESVVPGESQEAPDAGQELESYATLEEMDEETG
PSQSVPGDRLLPHLSETHRSPEEPDHHVIVIVSDTDSEGDHEEESEEEEEEEEEEEQDYE
DEEEEDEDDDDDEDGGIGEEGEESNEGSGSRDGNEAYEGDDTEGPEDPGTETEESLGATD
STQHMADSQSFETSTLDVFEAPVTSSAPRPHPQSSRRPQHPLPPRLNILAPPAQELGPPA
QVQRLPVRRPSVGRGLQLSSGMASSAQHFYEDDDRMVPSTPTLPPPRSDGFAEAIHSPQV
AGVSRFRFGPSDDLPQTSSSHSDLGQLPSQGLGMYESSVFLGAHEEESGGRSVPTTPLQI
AAPVTILSEIVAIEAIEHASQSVPMVSTSTPSLSAPAGPSGVEERDDMFMDAGDSAEASF
EAVSQTEAEELAQLSDEACLPSTSQEPSSSSADTSSSQPPKVRTGSGRQWTVGRGSRSFV
KRDGVMGMRGRFAR
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgctgcagctattggagcggtcggaaatatcaaaactccccaaaact
gtcttgactaaattagagaagtatatttttgaacagcaatgtgaagttgattgtctgaag
gcacaacaggagcaatatcgtgtggataatgaacaacagtattttgacatcgagaagaag
tttgcagagagtcaggctcagtttgtgtcccagactcaagagcatcagatactgaaagaa
gagtactgcaaactggaggatgagctgaaatgcttacgagagaaaaataaggagcaagtg
tcttcatataccaaactagaatcacatcagaatgaactttccaaagccaaagttgagctt
gaggccgaaaaacgagagcttgtgcggacattggaaagaagatcccaggagatggaacaa
caaagcgaggacctgaagcgtattaatgatagattggtggaagtcagttcagagaagatg
cagcttcagctcaagctggatgagtcagaagccactgaggtctcaatcaagtataaagag
aagcgaatggagcaggagaaagatctactccagaatcaggtgacctggctgaaaactgag
cttaaggccaagagtgaagagctgctgtctctttcccggcagaaaggcagtgagatcctg
gagctccagtgcaaccttaataacaaggaggatgaaatcgcccacctccaagatcaggtc
accagtctgaaggcatccaatgagaaacttcagaggcaagcagaggagatgatcaccaag
atgagagaggctaagcaacagcaagccagtttggaggagaagttcagtaatgagctcaat
gccaacatcaaactctcaaatttgtataagggagctgcagctgatgcagaggccaagagt
gaggagctcagcagagctgttgatgaacttcacaagctgcttaaagaggctggagaggca
cataaagctctggaagtgaagatggcagagctggagagttgtaaggacaaagaaatcgct
gaactaaaagagaaaataagcagccaggagaaagagctggataatgcaaatgagctgctg
tctgatgccaaacacagaggaactacttcaattttttcagaggagcaggtgaccacaatg
tctcccacagcagctgcaattgccaaaatcatcaaaccaggcatgaaacttacagagatt
tatacagcttatgttaagacccaagaacagctacaacatgagaaactagagaacaaacga
ctgcacaagtacctggatgacattgtgcaggagatggaagcaaaggcgcccatcctgaag
agacagagagaggagtatgagcgcatgcaaaagtctgtttccagtctctctgctaaatta
gagcaagctgtcacggaggtccaccgcttgcagaaagaagcagatgaaaacaacaaacgt
gcatctgtgttagagagagataaccggaggtttgaggtgcagctggctgacatgtctcaa
caggtgcgggtcctccttattgagctggaggaagcgcgtggtaatcatgtgatacgtgag
gaggatgaggtgtgttctgcggatgtgagcagcacatcagaggtgatttctcaacacctg
gtcaccttccgcactgttgaagagctgcagcagcagaaccagcgactcctagtggcacta
agagatctcagtgaggaaaaggaaaaggatgagttagagggagacaccatgaaacggcat
gaggtggagaaatatctcgaggagcttcagcgtgagttggagcagctaaaggaaaagaga
gctcaggatctgcagaaggttgacgctgtggcacgacaaagggatatgttccgcatgctt
ctgacccaggccactggagtcaccttcccacagggtgctggtaatgaggagcttatgctg
acctccaccccccgtcgttctccagccatcacacccactgcaggcacccctacaggactg
gttgccactgtgatagaatccactgagtcagtagaagccaaggctgcactgaagcagctt
caggaagtctttgtggcctataaaaaggaaaaaactgagtctggaaaagccctgactgag
caaagcgagaaactacaggatcaagtgactgaactccgctctgaaaacaccaagatctcc
acacagctggagttcacctccaaacggtatgagatgctccaggataacgtggagggctac
cgtaaggagattgcctctctgaatgagaagagtcagaaacaggctgcagcaattcagcag
agtgaacagaccatacacaccctcaaccaggacctccgagcagcagctgagaaactctcc
attgctgagtctgaagcagagaacctgcgtaaagagagagacatgttgaagatggtggag
atcagactgacccaggagaaagagtccttccaggcccaaaggcttggccaaaacatgctg
ctgaccaacctcaaatcaatacaggcaactctagagcactccgagacggagaccagacag
cggctgactgctcagattgagaagcaggagcgagagattgctcagctccagaagagactc
gagaatgaggtggaacagaagcacctgctggcacgcaatcaagatatgcagctgatggat
gttaagaagcagctggaaacacagacttcccagtactacaggacaagagagcagcttagt
gctgcccaacttgagcttaacaatctaaagctgcagatgagtagcaaggagagccggctg
ttatcccccacaatacgtacaggcctgcaaggcagtgaaggtgacatagaggctctgcgt
gctcagctgaagcaggctgagagcaaggtagaagagctggctgaacgactgaagaacact
actgcaagcatggaacagtacaaagccatgagtcttagcttagaggagtccctggataaa
gagaaacgggtaactgagcaggtgcgatcatctgtgcaaagccgggtggaggcggctcag
gaactgtataaacagctggagcagaaacttctggaagcagacaaggagaagcagagtttg
ctagaagagaaaagcaaagctgttgctgctgtggagcaagagttgaatgagctgaagaaa
tctctaagcagcctgcagggggagcaccagagcgtcctggagagagctgctgttgctgct
gcacaggaacagcaggccatcctggacagtcaggagcaggctaagatggcagctgaggca
caggataagtacgagagggagatgttgctgcatgcagctgatgtggaagcactgcaggct
accaaagcacaggctctgctggcagctcatctcagacagcagctggaggagaaagttcag
agcaccagtgcacagcttctagaggctcgtgtctcttgggaggagcaagagaagattctc
aaggaggagcagtctaagttagagtctcgctgtgaggatctgcagaggcagaacacactc
cttcacgaacaaatacagactctgagtggacaaatggccagtcagctgctgcgagccacc
agcgagagtccactcaacgtctctctgacagaggagggcaagtctcaggagcagcttctg
gagatcctaagatttgtgcggcgtgagaaggagatcgcagagtcccggtttgaggtggtc
cagggtgagagtctgaggcacaggctgagagtggaacatctggagagagaactgaaggat
gtgcaggagagtctgaatgcagagagagagaaaatgcaggtgactgcaaagactctggcc
cagcatgatgagctgatgaagaagaccgagaccatgaatgtgctaatggagaccaataag
atgctgagggaggagaaaaagaaactggaacaggagctgcaggatacacaagccaaggta
cgtaaacttgagtcagacatcttgcccatgcaggagtccaatgcagagctgagtgagaag
agtggtatgctacaggcagagaaaaagcttctggaagaagatatcaaacgctggaaagct
cgcactcagcacctggtgagccagcagaaggacactgacccagaagagtacaagcggctg
cactctgagagggaagcgcatctcaaacgcatccagcagcttgtcgaggagactagtcgg
ctcaaagctgaagcttccaggaacagtggctctttgactatgatgcagtctcaggtgcag
aacctaagggagaacttggggaaggtgatggtggagagggacagcctaaagaaagaccag
gaggccaaaaatctggacatccaggagaaactaaaaacaatcgcacaagttaaaaagatt
ggtcgacgttacaaaacccagtacgaagagctcaaggttgaatatgacaagttggtagct
gcagcagcatctgcacctgctcaggatcaagaggcacagcaggcatcagctcaagaaatt
caggccctcaaagagtccctcaaccaatcagagaacaggactagagaactggaaggccat
ctggagaatctcaatagaactgtaggagagcgggaaacagaggcacgcaatacacaggaa
caggcctctcgtctacaagcggagctgacgcgtctcaggcaggagcttcaggagaaatca
tctcaggaggagcgactcaaacagcagctgactgaaaaggaggagaggaccaagaaggca
atagtaatggccaagcagaagatcagccagctttctggtgtaaaaggtcagctccagaaa
gaaaatgaggagctgaagcaacaaaaagaggaattggaagtgcgagtgagtgcactaaag
tctcagtatgagggtcgtctgagcagacaggaaagggagctgcgagatctccgcgagcag
caggagagacatggagaacagagagatgagcctccggagcagggctccagcaagacccag
gaaccgcaaaggacaacagaacagcgacagatctctctgaagtccacaccagtggcagaa
agaggaagtgcaagcacttcagagcccccaactgcgaacataaagcccacgccactggca
gcaacccccagcaagcctccagccattccaggaaacaaatccaccccaagggccagcatt
aaacctatgatcactcctgccccagtgcccacccctacacccactgccacagtcatgccc
accacgcaggtggagagccaagagcctatgcagtcatctgagggcccgcttgagcatgtg
actgtgtatggcagtgccagcggttcagtgcggtccacaagccctaatgttcagaccacc
cttgctcaacctctgctgaccattcaacagcagagccaggccactgcgttcatccagccc
acccagcaacaaacccaagcccctgctgaaccatccaatcaggaacctctagctgctgta
atgctcccaaactcacagttagactggcctctttctacatccacagggatatggagtgcc
accgctagcacaagcagtgccggtgcagtgtccgcatctcctagtagtgccttgagcaaa
cgcccccgtgaagaggaacaagagagcatgtctgctgacacacagtctcaggatgagccc
attgacactcccttttgcaagagggttcgcattcatagagtaggtctggaggaagagatg
ctggctgaagacagcactgaggctgagagcgttgtaccgggtgagagccaggaggctcct
gacgctggacaggagttggagagttacgctactttggaggagatggatgaggaaacagga
ccgtctcagtctgtccctggagaccgacttctgccccatctatctgagacccatcgaagc
ccggaggagcctgatcatcatgtcatagtcattgttagtgacacagatagtgagggagac
catgaagaggaatctgaggaagaggaggaggaggaggaagaagaggagcaggattacgag
gatgaggaagaggaggatgaagatgatgatgatgatgaggatggcggtattggggaagag
ggagaagagagcaatgaaggtagcggcagcagagatggcaatgaggcctacgagggggac
gacaccgagggccctgaggatccaggcactgagacagaggaaagtcttggagcgacagac
tccacccaacacatggcagattctcagagctttgaaactagcacattggatgtttttgaa
gcacctgtcaccagttctgcccctcgacctcacccccaatcatccaggagacctcaacat
cctcttccacctcgtctaaacatcttggccccacctgctcaggagttgggaccccctgct
caagtccagcggctcccggttcgacggccgtcagtgggacgaggcctccagctttcttct
ggaatggccagtagtgcacaacatttctatgaggatgatgacaggatggttcctagtacc
cctacacttcctcctcctcgctcagacggatttgctgaagcaatccattctccacaggtg
gcaggcgtgtcacgatttcgattcggtccttcagatgatctcccgcagaccagctcctct
cactcagatcttggccagctgccatcacaaggtttaggcatgtatgagagttctgttttc
cttggagctcatgaggaggagtcaggaggccgcagtgtgcccacaaccccactacagatt
gctgctcctgtgacaattttatcagaaatcgtggcaattgaagcgattgagcatgcttct
cagtctgtgcccatggtgagcacctccacacccagccttagtgctcctgcaggcccgagt
ggagtggaggagagagacgacatgttcatggatgcaggagacagtgctgaggcttcattt
gaggctgtgtcacagactgaggcggaggaactagcccagctatcagatgaggcctgtctg
ccttccacaagccaggaaccttcatctagttctgcagacacaagcagctctcagcctcct
aaagtcagaacgggatctgggagacagtggactgttggtcgtggttctaggagctttgta
aagagagatggcgtcatgggtatgagggggcgttttgccaggtga
DBGET
integrated database retrieval system
