Sinocyclocheilus grahami (golden-line barbel): 107568838
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Entry
107568838 CDS
T04918
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107568838 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107568838 (lamb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
Alanine_zipper
EzrA
Motif
Other DBs
NCBI-GeneID:
107568838
NCBI-ProteinID:
XP_016110313
LinkDB
All DBs
Position
Unknown
AA seq
1782 aa
AA seq
DB search
MSILFLFVSLKVLSAASAQEPDLAHGCAHGSCYPATGDLLVGREMNLKASSTCGLRWREP
YCIVSHLQEEKKCFHCDSRRTYDPYSNPMSHRIENVITTFKPHRKKSWWQSENGKSDIYL
QLDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQVYRYFAFDCESTFPGISHGPLR
KVDDVICESRYSDIEPSTEGEVIYRVLDPAIQIEDPYSPNIQNQLKITNLRLNLTKLHTL
GDNLLDSRTEIKEKYYYAIYELVVRGNCFCYGHASECAPIDGIRDDIEGMVHGRCVCKHN
TKGLNCEQCDDFYNDLPWGPAEGRNTNACKKCNCNGHSKECHFDMAVYLATGNVSGGVCD
NCLHNTMGRNCETCKPFYYQDPTRDIRDPGVCVACDCDPDGSLNGGICDGHDDPSLGMIA
GQCRCKDNVEGARCDKCKPGFFGLSASDPRGCQPCKCDPRGTVSGSSQCDPVNGDCFCKR
LVTGHRCNQCLPEHWALSHDANGCRGCDCDVGGATDNQCSMETGQCHCRSHMIGRQCNQV
ESSYFFMALDHYIYEAENAKLAQGSAFEEREYQPGRHVSWTGTGFARAPEGGTLEFAINN
IPYSMEYDILLRYELQMPRDWEEVRVMVIRPGPIPTSSPCGNTIPADDLLTVSLPSGARF
VVLPQPMCLEKGVSYKLRVEFIPYADRNSITSTNAFVLVDSIALLPRYSSLEMFTAGDPA
SVARKQSYERYRCHETAKSVSRPQMSEVCAKLITSMSALINDGAMPCECDPQGSLSSECD
VRGGQCRCRPNISGRCCDKCAPGAYGFGPSGCKLCECSLEGSQSRFCDQYSGQCPCRAGA
FGQRCDGCQAGHWGFPNCRPCECNGHADECHQRTGACINCRSNTAGDKCDRCANGYYGNP
ALGLGSLCRSCPCPEGPNSGRHYAASCYQDNRNQQVVCNCNQGYTGPRCDECAPGYYGDP
SKPGGRCQPCRCSNNIDLSDPEACDKHTGQCLKCLYNTEGPDCGVCKSGYYGDASRRNCR
KCTCNFLGTERSQCLSRDDCVCQRATGQCQCLPHVIGQTCDHCAPNYWNLASGRGCEPCG
CDPNNAYTSACNEFTGQCQCRVGFGGKTCKDCQENHWGDPRVLCRACDCDPRGIESSQCN
RLTGHCVCQQGVSGVRCDQCARGFSGTFPDCKPCHQCFGDWDRIIQDLATRTKALTDRAK
ELQTTGLTRAFERRFKELEDMLAQARDIVNARNATAEAVTTLMGMIEDLRAQIGETTDTL
NQLEGDLTAVQDSNYEASNALSTLEREAKELKLNSDQLNRQLDLLKNSNFLGAYDSIRAS
YNKSRDAEHRANRSTTDIPSTVSQSADTRKKTERLITQKRDDFNRKNAANKRTLTDLNAK
AQNLDIKKINEKVCGAPGGAPCVDSPCGGAGCRDDEGKRHCGGLNCNGAVAVANNALDRS
KHAEKELDKAMGVVEELFKQVADAKTKAQEAKDKAQAALEKASDTKNKVDHSNNDLRDLI
KQIREFLMEEGADPDSIEAVANRVLELSIPASPRQIQHLADEIKDRVKSLSNVDAILEQT
QNDVRKAEQLLLDAKKARNKAEGVKSTAESVKKALNDAGRAQAAAEKVIQKARNDIGLTQ
NRLAQIQSETTARERDLNNAMGRLGDLGRQIEALKTKLANNSLDAARAEETATMARDKAN
EAKEILEGELSDKYRTVQGLMDNKAKTMQDAKQKAERLRDEAKELLRDAQDKLQRLAELE
KDYEENQKVLEGKARQLDGLEDKMKAILNAINKQIQIYNTCQ
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgtctattttgtttctttttgtttccttgaaagtcctgtcagcggccagcgcacaggag
cctgatcttgcccacggttgtgcccatggaagctgttaccctgcaaccggtgacctcttg
gtgggtcgagagatgaacttgaaagcttcatccacctgcggcctgcggtggagagaaccc
tactgcattgtcagccatctgcaggaagagaagaagtgtttccactgtgattcacggcga
acttatgatccttattccaaccccatgagtcaccgcattgagaatgtcatcaccaccttc
aaaccacaccgcaagaagtcctggtggcagtctgagaatggaaagtctgacatttacctt
cagctggatctggaggcagagtttcactttactcatctcatcatgacttttaagactttc
cgtccagcggccatgttgattgagcgatctgcagattttggccgaacctggcaggtgtac
cgttacttcgccttcgactgtgagtccaccttcccaggaatttcccatggtcctcttcgt
aaagttgatgatgtcatctgcgagtccagatattctgacatcgagccgtccacagaagga
gaggtgatttatcgtgttcttgaccctgcaatccagatcgaagacccttacagccccaac
attcagaaccagctgaagatcactaatctccgtctgaacctcaccaagctgcacactctg
ggtgataacctgctggactcacggaccgagatcaaagagaaatactactatgccatatat
gagctggttgtcaggggcaactgcttctgctatggccacgcctccgaatgtgctcctatt
gacggcatcagggatgacattgagggcatggtacatgggaggtgtgtgtgcaaacacaac
accaaaggactgaactgtgaacagtgtgatgacttctataatgacctgccctggggacca
gctgagggccgtaacactaatgcctgcaaaaaatgcaactgtaacggacactccaaagag
tgtcattttgacatggcagtgtatctggctacggggaacgtcagtggaggtgtgtgtgac
aactgtctccacaacaccatgggccgcaactgtgagacctgtaaacctttttattatcag
gatccaactcgagacatcagagaccctggagtctgcgtggcctgcgactgtgacccagat
ggttctctgaacggtggcatttgtgatgggcatgatgacccctctctgggcatgatcgct
gggcagtgccgctgtaaagacaacgttgaaggagcacgctgtgataaatgcaagcctggt
ttctttgggctcagtgctagtgatcctcgtggctgccaaccatgtaaatgtgaccccagg
ggtacagtgtccggtagttctcaatgtgaccctgttaacggagactgcttctgcaaacgc
cttgtcactggacacagatgcaaccaatgtctgcctgagcactgggccttgagtcatgac
gccaatggctgcagaggatgtgactgtgatgtgggtggagctacagacaaccaatgctca
atggaaacaggccagtgtcactgtcggagtcacatgattggtcgccagtgtaaccaagtg
gagtctagttatttcttcatggccctcgaccactacatatacgaggctgaaaatgccaaa
ctggctcaaggctctgcatttgaggagagagagtaccagccgggccgtcacgtctcgtgg
acaggcactgggtttgcacgggctcctgaaggtggtacgttggagtttgccattaacaat
attccatattctatggaatatgacatcctccttcgctatgagcttcagatgccacgagac
tgggaggaggtccgtgtaatggtgattagacctggccccatacctaccagcagtccatgt
ggaaataccatccctgcagatgatctgctaactgtatcgctcccatctggtgccaggttt
gtggttcttcctcagccgatgtgtttggagaaaggagtgagttacaaactgcgtgtggag
ttcatcccttatgctgacaggaacagcattacctcaactaatgcctttgtacttgttgac
tctattgcccttctccctcgttactcttctctagagatgtttaccgcgggagaccctgcc
tccgtcgcacgaaagcagagctacgagcgttaccgctgccacgagactgccaagagtgtg
tcccgtccacagatgagtgaagtgtgtgctaaactcatcaccagcatgtctgccctcatt
aacgacggcgcaatgccttgtgaatgcgatcctcagggttcgctcagctctgagtgtgat
gtccgtgggggtcaatgccgctgcaggcccaacatatcaggccggtgctgtgataaatgt
gcaccaggagcttacggctttggcccttccggatgcaaactttgtgaatgtagtttggag
ggctcgcagagccgattctgtgaccagtactcaggacagtgtccatgtcgggccggtgca
tttggtcagcgctgtgatggttgtcaggctggacactggggcttcccaaactgcaggcca
tgtgaatgtaatggacatgctgatgagtgccaccaaaggactggagcctgtatcaactgc
agaagcaatacagccggggataaatgtgacaggtgtgctaatggttactatggaaacccg
gctcttggtttagggagtctgtgtcggtcctgcccctgtcctgagggccccaacagcgga
cgccactatgccgcctcttgttaccaagacaaccgcaaccaacaggtggtctgcaactgc
aaccagggttacacaggtccacgatgtgacgaatgtgctccgggttattacggcgacccc
tctaagcccggtggacggtgccaaccttgtcgttgcagtaacaacatcgacctatcagat
cctgaggcatgtgacaagcatactggccagtgtctcaagtgcctgtacaacactgaagga
ccggactgtggcgtgtgcaagagcggatactatggagatgcttcccgccgcaactgccgg
aagtgcacatgcaacttcttgggcacggagcgcagtcagtgtctatctcgagatgactgc
gtgtgccagcgtgccacaggacagtgtcagtgtctgcctcacgttattggacaaacctgt
gatcactgtgctcccaattactggaacctggcgagtggacgaggctgtgagccctgtggc
tgtgaccccaacaatgcctacacatctgcctgtaatgagttcacaggtcagtgccagtgc
cgtgttgggtttggagggaagacctgtaaagactgccaggagaaccactggggtgaccca
agagtactgtgtcgagcatgtgactgcgacccccggggcatcgagtcatctcagtgcaat
cgtctgactggtcactgcgtgtgccagcagggagtttctggcgtccgctgtgatcagtgt
gcccgtggtttctctggcaccttccctgattgcaaaccttgccaccagtgctttggggac
tgggaccgcatcattcaggatctggcaaccagaaccaaagctctcacagatcgagccaag
gagcttcagaccaccggcttgactcgagcctttgagagaagatttaaggagttggaggac
atgctggcacaggcgcgggacattgttaacgcccgcaatgccactgctgaggctgtgacc
actctgatgggcatgatcgaggatctcagagctcagattggtgagaccacggacacactg
aaccagctggagggagacctgaccgctgtgcaggacagcaactatgaagccagcaatgca
ttaagtaccctggagagagaagcaaaagaactcaaactgaactcagatcagcttaaccgt
cagcttgacctcctcaagaactccaacttcttgggtgcatatgacagcatccgggcctcg
tacaacaagtcacgtgatgcagagcaccgcgccaacagatctaccactgacattcccagc
acagtgagccaatcggcagacacccgcaagaaaacagagagactgattacccaaaagaga
gatgattttaaccgcaaaaatgctgccaacaaacgtacactcacagacttaaatgctaaa
gctcagaatttggacataaagaaaatcaatgaaaaggtatgtggagcaccggggggtgct
ccatgtgtggacagtccttgtggcggtgctggttgtcgtgatgatgaaggcaagcgccac
tgtggtggtctgaattgcaatggagctgttgcagtggccaacaatgccctggacagatcc
aagcatgcagaaaaagagctggataaagctatgggagtagtggaggagctttttaagcag
gtggcagatgctaagaccaaggctcaggaagctaaggataaagcccaggcagctttggaa
aaagctagtgataccaaaaataaggtggatcattctaacaacgacctgagggacctcatc
aaacaaattcgtgaattcctcatggaggagggggcagatcctgacagcattgaggcagtg
gccaatcgggtgctggagctgtcaatcccagcttctcccaggcagattcaacacctcgca
gatgagattaaagaccgtgtcaagagcctatccaatgtggacgccattctggaacagacc
cagaatgacgtccgcaaagcagaacaactgctgctggatgccaagaaagccaggaataag
gcggagggagtgaagagcacggctgagagtgtgaaaaaggccctgaacgatgccggcagg
gctcaggcagctgcagaaaaggtcattcagaaagctagaaatgacatcggcttaactcaa
aaccgtctagcacagatccagtcagagaccacagctcgtgagagagatcttaataatgct
atgggcagactgggagatctgggacgccaaatagaggctttaaaaaccaaacttgccaac
aacagcctggatgcagcccgggcagaggagacggccactatggcccgggacaaggccaat
gaagctaaagagatcctggagggcgagctgtccgataagtatcgtactgttcagggtctg
atggacaataaggcgaaaacaatgcaggatgccaagcagaaagcagagcgcctgagagat
gaagccaaggagctgctaagggatgcccaggataaactgcagaggctggcagagcttgaa
aaggactatgaggaaaatcagaaggtattggaaggaaaagccaggcagctggatggcctg
gaagataaaatgaaggcaatcctgaatgcaatcaataagcagattcagatctacaacacc
tgtcaataa
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integrated database retrieval system
