Sinocyclocheilus grahami (golden-line barbel): 107581769
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Entry
107581769 CDS
T04918
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107581769
04020 Calcium signaling pathway
107581769
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107581769
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107581769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107581769
NCBI-ProteinID:
XP_016122905
LinkDB
All DBs
Position
Unknown
AA seq
2163 aa
AA seq
DB search
MLVILLNCVTLGMFHPCEDLKCQSEWCVVLQVFDDCIFAFFAVEMVIKMIALGIFGSKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFMPDNVKALYNLSHMSPYYMNEEGED
NPFICSSNKDNGMLRCSQVPPLKEGVECTLNASPPGHAYSGLDGTGNSSCVNWNQYYSEC
KPGELNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGS
FFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTLASYSEPGSCYEEMLRYISHL
YRKVKRRASRIYSGWQSKRRKKVNPNSGLSGGGGGGGDGGANGHSRHRGGGHWVRSIHNL
IQQHQQQHCHLSNGSPSPVTATGPGEALEMRSIATGPQLTVSSQPTAMHNLSSRTPSVHS
IYQGDFQEAPQGRTSTVVGVPALGRLNSGMNYPTILPSLICSYTGSSSAGKGRRGSDANT
GCDAIDPFEKLHQLMGEHSHSRVLLQMAGVVPSPLLLELLSCPYCARALETMDVELGDSD
YSRSEGDVVYEFSHGAEFKPCRASHHKILEERNRLAQYWVDFRDRLIRIVNSKYFNRGIM
IAILINTLSMGIEYHEQPEELTNILEISNIVFTSMFVLEMLFKLLAFGIFGYIKNPYNIF
DGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCM
LLMLFIFTFSILGMHLFGCKFSLQMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVL
YNGMASTTPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDADEEKRSVNFEE
EEKMGELRATELKMYSLMMSANGHVDPRGTLPPPIIMRTAATPMPTPKSSLSPESVFGLT
ESRRGSGISIDPNAFDQKSLTSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRKDTSG
ERESLLSGDGRGSFEDEDLEGEKLANISGSSLQHPSSLDIPELPQTPSFSSLGDYHDCNG
RSLHLPTDLSANLSKEDSIAEEDMDDSFCFRLKRTFEAYKPKWCKDHEEWSLYLFSPQNK
FRMMCQRLISHKLFDHVVLVFIFLNCITIALERPSIQPSERKFLSISNYVFTVIFVAEMT
VKVVALGFCAGKQSYLQSTWNVLDGVLVSVSLIDILVSLAYTGGNRILGILRVLRLLRTL
RPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGGDT
KNITNKSDCLQANYKWIRRKYNFDNLGQQHSYHVQGPEIPVLSAAVVPSHPVPFSTASVI
WFFCVYPALTLLLSVCMTVSTEAQQRPYYADYSPARLYIHTLCTNHYLDLFITCIICINV
VTMSIEHFNQPHYLEEALKYCNYVFTIIFVIEALLKLVAFGFRRFFKERWNQLDLAIVLL
SIMGITLEEIKMSAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGN
LGLLFMLLFFIYAALGVELFGKLECNDNNPCEGLSRHATFENFGMAFLTLFRVSTGDNWN
GIMKDTLRECLPNESNCFSYLPLVSPIYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAK
EDAEMDAEIEMEMEMARRLSNISAGSSSGPEGRATYVGPHPQKHRQDEGMQRTQENLLSP
RKMSVSRMHSLPNDSYMFRPVRPASAPYPLEEVEASQGYLELGSITSVHSQPCESHSLLQ
VPGVPPHSQFNYLPKIPPPMPSPTHSIGRTLRRQKAIKNDSVDVQSFDSKDNPNRQVGIT
TGSFKLRVPRITGPSIPQGSPLLPPRGHAPSVCTFQQPHSQHNIPSRPPSLASSSRSTSP
SGSMFDSADPTDEEVRHINSTARLWVGTRAEARSHSLSPYTTSGMLLPIPVKNCSSAANL
SVKDPKKCFSVDKEGFLEKPYGTDDHRRHSIEICSSVDDGLFGQELSEKRHVPMRGQSLY
IPRKKKMSPPCIAIEPLFETEAPASLASMKKLSESSMLLRRRTPSYDLALQRDSLDLPEN
QLSTQPLIKVERHPSHCAEYLSLPHPTPMGGLAGILCENTQPTPFDSRFEESTDFSSVNR
TAQ
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgattctgctgaactgtgtgactctgggcatgttccatccatgtgaggacctc
aagtgccagtctgagtggtgtgtcgtcctacaggtgtttgatgactgcatcttcgccttc
tttgccgtggagatggtcatcaaaatgatagccctggggatttttggatcaaagtgttac
cttggtgacacatggaaccgcctggacttcttcattgtcatggcagggatgatggagtat
tcactggacggtcataacgccagcctgtcagccatccggactgtgcgagtgctcaggccc
ctgcgagccatcaacagagtgcctagtatgaggatactggtgactctgcttcttgatact
ctgcctatgttaggcaacgtcctcctgctgtgcttttttgtcttctttatattcggcatt
gtcggggtgcagctgtgggctggacttcttaggaatcggtgtttcatgccagataacgtg
aaagccctttataatctgtcacacatgagtccgtactacatgaatgaagaaggtgaggac
aaccccttcatctgctcctccaataaggacaatggcatgctgcgctgtagtcaggtgccc
cccctcaaggagggtgttgagtgcactttaaatgcatctccaccgggacatgcctactct
ggcctggatgggacaggcaacagcagctgtgttaactggaaccagtattacagtgagtgt
aaacccggggagctcaacccgcacaaaggggcagtgaacttcgataatattggatatgcc
tggattgcgatattccaggttattactttggaaggatgggtggacatcatgtattacgtt
atggatgcccactccttttacaattttatatattttatattgcttattatagtgggttcc
ttcttcatgatcaacctgtgcctggttgtaatagcaacccagttctcagaaacaaagcag
cgtgagaaccagctgatgcaggagcagcgagcacgttacctctccaacgacagcaccctc
gccagctactctgagccggggagctgctacgaggagatgctcaggtacatcagccacctg
taccgcaaggtgaagcgccgtgcttcccgcatctacagcggctggcagagcaaacgcaga
aagaaggtgaaccccaacagtgggctgagtgggggaggaggaggaggcggcgacgggggg
gccaatggtcatagcaggcacaggggtggcggacactgggttcgctccatccacaacctc
atccaacagcaccaacagcagcactgtcacctcagcaatggcagccccagtcctgtgacc
gctacggggcccggcgaggctctggaaatgaggtccatcgcaacggggccgcaactgact
gtgtcctcacagccaaccgccatgcacaatctttcttccaggactccgtcagtgcacagc
atttatcaaggtgactttcaggaggccccgcaagggcgaacgagcaccgtggtgggtgtg
ccggcactcgggcgactaaacagcgggatgaattatccgaccatcttgccctccctcatt
tgcagctatacaggcagcagttctgcagggaaaggaaggagggggtcggatgcaaataca
ggatgtgatgcgattgatccctttgagaagctgcaccagctcatgggggaacatagccac
agtcgtgtgctgctgcagatggctggtgtggtgcccagtccactgcttcttgagctcctg
agctgcccgtattgtgcaagggccctggagaccatggatgtggagctcggtgattcagac
tactccagatcagaaggggacgtggtgtacgagttctcccatggagcagagttcaaaccc
tgccgtgcatcccatcataaaatcctggaggagcgtaaccgcctggctcagtactgggtt
gacttccgggacagattgatacgcatagtaaatagcaaatactttaatcgaggaattatg
attgccatcctcatcaacaccttgagtatggggattgaataccatgagcagcctgaggag
ctgacaaacattctggagattagcaacatcgtcttcactagcatgtttgtcctcgaaatg
ctcttcaaactgctggcctttggcatctttggctatatcaagaacccctacaacatattt
gatgggattattgtagtcataagtgtgtgggagatcatagggcaggcggatgggggtctg
tcagtgctgaggacgtttcgtctcctgcgtgtgctcaaactggtgcgcttcctccctgct
ctgcgcagacagctggtagtcctgatgaagaccatggacaatgtggctacattctgcatg
ctgctcatgcttttcattttcacattcagcattcttggaatgcacctctttggatgcaaa
ttcagcctgcaaatggagaatggagacaccattccagacaggaaaaactttgattccctg
ctgtgggccattgtcactgtgtttcagatcctgacccaggaagactggaacgtggtcctc
tataatggaatggcttccaccaccccatgggcggctctttactttgtggctctgatgact
tttgggaattatgtgctctttaacctactggtggccatcttagtggagggatttcaggca
gagggagatgctaacaggtcagatgcagatgaggaaaagcgctcggtgaactttgaagag
gaagagaagatgggggaattgcgagctacagagttgaagatgtactctctgatgatgtca
gcgaatgggcatgtagatcctcgaggcactttgcctcctccaatcatcatgcgcactgct
gccacccccatgcccactccgaagagctcgctcagccccgagtcagtgtttggtttgacc
gagtccaggcggggcagtggcatctcaatagatccaaatgcttttgatcaaaaatcactg
actagcccaagaagatctccatgccacccccgtggctcaggcagtaactggggcagccgc
aggtcaagctggaacagcttaggacgggcgccgagtttgaaaaggaaggacacgtctggg
gagagggagtctctgctgtctggggacggcaggggcagctttgaggacgaagacttggag
ggggagaagctggccaatatcagtgggagctcactgcagcatcccagctctctagatatc
cctgagctgccccaaacccccagcttcagctcactgggagactaccacgactgcaatgga
agaagcctgcacctgcccactgacctgtccgccaacctcagcaaggaagactccattgca
gaggaggacatggatgatagcttctgtttccgtctcaagaggacgtttgaggcatataaa
cctaagtggtgtaaagatcatgaagagtggtccctttacctgttctctcctcagaacaag
tttcggatgatgtgtcaaaggttaatttctcacaagttgtttgatcatgtagtcttggta
ttcatcttcctaaactgcattaccattgctctggaaagaccctctattcagccatccgag
cgaaagttcctcagtatctccaattatgttttcactgtgatttttgttgctgaaatgact
gtgaaggtggtggccctcggcttctgcgccgggaagcaaagttatctgcagagcacctgg
aatgttctggatggggtgctggtctctgtctctctcattgacattctggtctctctggcc
tatactggtggaaaccgaatccttggcatcctgagggttcttcgtctgctgagaactctg
cggccgctgagagtgattagtcgtgctcctggactgaagctggtggtggaaacgctaata
acgtccctgaggcccattgggaacattgtgctgatctgctgtgccttctttattgtcttt
ggcattcttggagttcagctcttcaaaggaaagttttaccattgtgaaggtggcgacacc
aaaaacatcaccaataagtctgattgtcttcaagcaaactacaaatggattcggagaaag
tacaactttgacaacttgggacagcaacacagctaccatgttcaaggcccagaaataccg
gtcctctctgcagcagttgtcccctcacacccagtgcctttttccactgcatcagtgatt
tggtttttctgtgtttaccctgcactgactcttctgctgtctgtctgtatgactgtatca
acagaggcccagcagagaccgtactatgcagattactctccagcccggctctacatccac
acactgtgtaccaaccactacctggacctcttcatcacctgcatcatctgcatcaatgtg
gtcactatgtctattgagcatttcaatcagcctcactaccttgaagaggcactgaaatac
tgtaactatgtctttaccatcatcttcgtaattgaggctttactcaagcttgtggcattc
ggttttcggagattcttcaaagagagatggaaccagctggatctagccatagtcctgctc
tctatcatgggcatcaccctggaggagatcaagatgagcgcagcactgccaatcaacccc
actatcatccgcattatgagggtgctgagaatagccagagtactgaagcttttgaagatg
gctacaggcatgagagccctgctagacacagttatgcaagctttgccacaggtgggaaat
ctgggcttgctgtttatgctcctcttcttcatttatgcggcacttggcgtggagcttttt
gggaaactagaatgcaatgacaacaacccatgcgaaggattaagcagacatgctacattt
gagaactttggaatggcctttttaacattatttagagtatcgacgggggacaactggaat
ggcataatgaaggacactctgcgagagtgccttccaaatgaaagtaactgcttcagctat
ctgcccctggtttcccccatctacttcgtcacctttgtgctaatcgctcagtttgtgctg
gttaacgtggtggtggccgtactgatgaaacacctggaggagagcaataaggaggctaaa
gaagatgcagaaatggatgctgagattgagatggagatggaaatggctcggcgtctcagc
aacatctcagcagggagctcttcagggccggaaggaagggcaacttatgtaggaccacac
ccgcagaagcatagacaggatgaggggatgcaaagaacacaggagaatttgctctctcca
cggaaaatgtcagtgtcaaggatgcactctttgcccaatgacagctacatgtttcgccct
gtgaggccagccagtgctccttatccactggaagaagtggaagccagtcaagggtacctt
gaattaggctccatcacctcagtccactcccagccatgcgaaagccattccctgctccag
gtccccggtgttcctccccattcccagttcaactacctccccaagattccccctcccatg
ccctctccaacccacagcataggcaggactttacgcagacagaaggcaattaaaaatgac
tccgtcgacgtgcaaagtttcgactccaaagacaatcccaacagacaggtaggaataact
acaggcagcttcaagctgcgtgttcctcggatcaccggacccagcatccctcaggggtca
cccttgctgcccccacgtggacatgcccccagtgtctgcaccttccagcagccccatagc
cagcacaatatcccttccagacctcccagcctggccagcagcagcagaagcaccagcccc
agtggctccatgtttgattccgccgatccgactgacgaggaggtccgccacatcaacagc
acagcacggctgtgggtagggactcgggcagaagcccggagtcactccctgtctccttac
accacctcagggatgctgcttcccatccccgtgaagaactgcagcagtgctgccaactta
agcgtcaaagacccgaagaagtgcttcagcgtggacaaggagggttttctggaaaaaccc
tatggtaccgatgaccatcgcaggcactcgattgagatttgctcttcagtagatgatggg
ctgtttggtcaagaactcagtgagaagaggcacgttcccatgcgtggacagtcgttgtac
attccccggaagaaaaagatgagccctccctgtatcgccatcgagcccctgtttgaaacg
gaggctcccgcttctctcgcatccatgaaaaagctgtcggagagcagcatgctactacgg
aggaggacgccatcttatgacctggccctgcagagggactctctggatttgccagagaac
cagctgtctacccagccgctcatcaaagtagagcggcacccctctcactgtgccgagtat
ctgtccctgccgcaccccaccccaatgggtggactggcaggcattctatgtgaaaacaca
cagccgaccccctttgacagccggtttgaagaatccacggacttcagctctgtaaacagg
acagcccaatga
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integrated database retrieval system
