Sinocyclocheilus grahami (golden-line barbel): 107585681
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Entry
107585681 CDS
T04918
Symbol
notch1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107585681 (notch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Notch
NOD
NODP
cEGF
DL-JAG_EGF-like
Ank_2
EGF_3
Ank
JAG1-like_EGF2
Ank_3
Motif
Other DBs
NCBI-GeneID:
107585681
NCBI-ProteinID:
XP_016128295
LinkDB
All DBs
Position
Unknown
AA seq
2130 aa
AA seq
DB search
MNRFLVKLTLLTAASFATAAQGQRCSEYCQNGGICELKPSGEASCRCPADFVGPQCQLLN
PCSPSQCRNGGVCRTRMKGNDVEPVCDCVLGYSGPLCLTPVNHACMGSPCRNGGTCSLLT
LETFTCRCPPGWSGKTCQQADPCASNPCANGGQCSAFESHYICTCPPNFHGQTCRQDVNE
CALSPSPCWNGGTCINEVGLYLCHCPPEYAGTHCERLYHPCHPSPCRNGGTCLQTSDTTY
ACTCLSGFTGQTCEHNVDDCTQHACENGGRCIDGINTYNCHCDKHWTGQYCTEDVDECEL
SPNACQNGGTCHNTIGGFHCVCVNGWTGDDCSENIDDCASAACSQGATCHDRVASFFCEC
PHGRTGLLCHLDDACISNPCQKGSNCDTNPVSGKAICTCPPGYTGSACNQDIDECSLGAN
PCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPG
YEGVFCQINTDDCASQPCLNNGKCIDKINSFHCECPKGFSGNLCQVDVDECASTPCKNGA
KCTDGPNKYTCECTSGFAGAHCELDINECVSSPCHYGVCRDGVAAFTCDCHPGYTGRLCE
TNINECLSQPCRNGGTCQDRENAYTCTCPKGTTGMNCEINIDDCKSKPCDYGKCIDKING
YECVCEPGYTGSMCNINIDDCALNPCHNGGTCIDGVSSFTCLCPEGFRDATCLSKHNECS
SNPCIHGNCLDQINSYRCMCEAGWMGRNCDININECLSNPCVNRGTCKDMTSGYMCTCRA
GFSGPNCQTNINECASNPCLNQGTCIDDVAGFKCNCMLPYSGEVCESVLAPCALRPCKNG
GVCRESEDFQSFSCACPAGWQGQTCEVDINECVRNPCTNGGVCENLRGGYKCRCNPGFSG
DLCQNDIDDCAPNPCSNGGMCQDRVNAFVCVCLAGFRGERCAEDIDECVSAPCRNRGNCT
DCVNSYTCSCSVGFSGINCEINTPDCTESSCFNGGTCVDGINSFSCACLPGFTGNYCQHD
VNECDSRPCQNGGTCQDGYGTYKCTCPHGYTGLNCQSLVRWCDSSPCKNGGSCWQQGASF
TCQCASGWAGIYCGVPRVSAAVLCHNTGQCVDVGNTHLCRCQAGYTGSYCQEQVDECMPN
PCQNGATCTDYLGGYSCECVPGYHGVNCSKEINECLSQPCQNGGTCIDLINTYKCSCPRG
TQGVHCEIDVDDCSPAVDLLTGEPHCFNGGRCVDRVGGYGCVCPAGFVGERCEGDVNECL
SDPCDPNGSYNCVQLINDFRCECRTGYTGKRCETVFNGCKDTPCKNGGTCAVASNTKHGY
ICKCQPGYSGSSCEYDAQSCGSLRCRNGATCVSGHLSPRCLCLPGFSGHECQTRMDSPCL
NNPCYNGGTCQPINDAPFFRCSCPANFNGLLCHILDYSFKGGQGRDIAPPEVEIRCEIAQ
CEGRGGNAICDTQCNSHECGWDGGDCSLNFDDPWQNCSTALQCWRYFNDGKCDEQCANAG
CLYDGFDCQRLEGQCNPLYDQYCRDHYADGHCDQGCNNAECEWDGLDCADDVPQKLAVGS
LVLVVHIPPDDLHNRSSSFLRELSGLLHTNVVFRRDANGEPLIFPYYGNEHELSKHKRSD
WTDPAQLLHRARRSLTAFMKPRLRRELDQMEIKGSIVYLEIDNRQCYQQSDECFQSATDV
AAFLGALASSGNLNVPYIIEAVTSECHIYAKITVIFLSSNKNINDNTLGLQEETPLFLAA
REGSYETAKVLLDHLANREIADHLDQLPRDIAQERMHHDIVRLLEEYNLVQNPALPLSPP
LCSPNTYLGIKPSPGGANNNNTAKKARKPSSKGVGGKDGGKDMRMKKKKAGEGKNGGIME
VGVLSPVDSLESPHGYLSDVSSPPLMTSPFQQSPPITLNQLQGLADTHMGGALQSLGKPF
DSALPPRLSHLPVANNGGGAQTAACDWLQRVQQQQAGFTTLIPTMLSATNMPQVMGYPTM
QSSHLGMPSHMIPNHAHQNRVPMRHQNSAASGHAHVSHHFLGDLTGLDLQSGSGHAPIQT
ILPQESQRMAPPISSTQFLTPPSQHSYSNPMDNTPSHQPQVPDHPFLTPSPGSPDQWSSS
SPHSNLSDWSEGISSPPTSMQMNHIPEAFK
NT seq
6393 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttcttggtgaaattaacgctactgacggcagcttcgttcgcgacggcggca
caagggcaaagatgctcagaatactgtcagaatggaggaatatgtgagctcaagccgagc
ggagaagcatcatgcaggtgtcccgcagacttcgtcggcccccagtgtcagttgctgaac
ccctgcagcccgtcgcagtgtcgtaacggaggcgtgtgtcgcacacggatgaagggcaat
gacgtggagccggtctgcgactgcgtgttgggatacagcggcccgctctgtctgacgccc
gtcaatcacgcctgcatgggctccccatgccgaaacggcgggacatgctctctgctcacg
ctcgagacctttacctgccgctgcccacctggatggtcaggtaaaacatgccaacaagcc
gacccatgtgcgtcgaacccctgtgccaacggcggacagtgttcagcgttcgagtcgcac
tacatctgcacctgccctcctaacttccacggacagacgtgccgtcaggacgtgaacgag
tgcgccctctcgccctccccctgctggaacggaggcacctgtataaacgaggtgggattg
tacctgtgccactgcccacctgagtatgccggcacacactgcgagcgcctctaccacccc
tgccacccctcgccctgcaggaacggaggcacctgcttacagaccagcgacaccacctat
gcctgcacttgtctgtcagggttcacgggtcagacgtgtgagcataacgttgacgactgc
acccagcatgcctgtgagaatggaggcaggtgtatcgacggcataaacacctacaactgc
cactgcgacaaacactggaccggtcagtactgtacggaggacgtggacgagtgcgagctc
tctcctaacgcttgtcagaacggagggacgtgtcacaacaccatcggcggctttcactgc
gtgtgtgtgaacggctggacgggcgacgactgcagcgagaacatcgacgactgcgccagc
gccgcctgctcacagggtgccacctgccatgacagagtcgcgtctttcttctgcgagtgt
ccacatggtcgcacaggtcttctgtgtcatcttgacgatgcctgcatcagtaatccatgt
cagaagggctcaaactgcgacacgaacccggtgagtggaaaagccatctgcacctgtccg
cccgggtacacgggatccgcctgcaaccaagacatcgatgagtgctcgctcggtgcgaac
ccatgtgagcatggcggacggtgtctcaacactaaaggctcgttccagtgcaagtgtctt
caaggttatgaaggtccacgctgtgaaatggacgtcaacgagtgcaagtcgaacccctgc
cagaacgacgccacctgcctcgaccagatcggtggattccactgcatctgcatgccaggt
tacgagggtgtgttttgtcaaataaacacagacgactgtgcatcgcaaccttgcctcaac
aatggaaaatgcatcgacaagatcaactcattccactgcgaatgtcccaaagggttctct
gggaatctgtgtcaggtggatgtggacgagtgtgccagcacaccgtgtaaaaatggtgct
aaatgcacagacggacccaacaaatacacctgcgaatgcacttcaggatttgctggcgct
cactgtgagctggacatcaatgagtgcgtgtcgagcccttgtcattacggcgtgtgtcgg
gacggcgtggctgctttcacctgtgattgtcaccccggatacacgggccgcctgtgcgag
accaatataaacgagtgcttgagccaaccctgccgaaacggaggcacctgccaggacaga
gagaacgcctacacctgtacctgtcctaaaggaaccacaggaatgaactgtgagataaac
attgacgactgcaagagtaaaccgtgcgactatggaaagtgcatcgacaagatcaacggc
tacgagtgtgtgtgtgaacccggatacacaggctcaatgtgtaacatcaacattgacgac
tgcgcgttaaacccatgtcacaacggcggcacctgcatcgacggcgtcagcagcttcacc
tgcctctgtcccgagggtttccgtgacgccacctgcctctccaaacacaacgagtgctcc
agcaacccctgtatccacggcaactgcctggaccagatcaacagctacagatgcatgtgt
gaggccggctggatgggacgcaactgcgacatcaacatcaacgagtgtctgtccaacccg
tgcgtgaacagaggcacctgtaaggacatgaccagcggctacatgtgcacctgcagagcc
ggcttcagcggtcccaactgccagacaaatattaacgagtgtgcgtccaacccctgccta
aaccagggcacctgcatcgacgacgtggccggattcaagtgcaactgtatgctgccttac
tcaggcgaggtgtgtgagagcgttttggctccctgtgctctgcgtccttgtaagaacgga
ggtgtctgtcgcgagtctgaggattttcagagcttctcttgtgcttgtcctgctggatgg
caaggtcagacgtgtgaggtggatattaacgagtgtgtgaggaatccttgcactaacgga
ggagtgtgtgagaacctgcgtggaggatataagtgccgctgcaaccccggattcagcgga
gatctgtgccagaacgacattgacgattgcgcgccaaatccgtgcagtaacggcggtatg
tgtcaggaccgtgtgaacgcctttgtgtgtgtgtgtttggctggtttccgtggtgagcgc
tgtgcagaggacatcgacgagtgtgtgagcgccccctgccgaaacagagggaactgcacc
gactgcgtcaacagctacacctgcagctgttctgtaggattcagcggcatcaactgtgag
atcaacacacccgactgcactgagagctcttgttttaatggcggaacatgtgtggacggc
ataaactctttctcatgcgcgtgtttgccgggattcactgggaattactgccagcatgac
gttaacgagtgcgactcacggccgtgtcaaaacggaggcacctgtcaggatggatacggc
acctacaaatgcacctgtcctcacggatacaccggactcaactgccagagtctggtgcgc
tggtgtgactcttccccctgtaagaacggtggctcatgttggcagcagggggcttctttc
acctgccagtgtgccagcggctgggccggcatctactgtggcgtccccagagtgtctgcg
gctgttctgtgccataacacgggtcagtgtgttgatgtgggtaacacacacctgtgcagg
tgccaggccggatacacaggcagctactgtcaggagcaggtggacgagtgcatgccgaac
ccctgccagaacggagccacctgcaccgattacctgggaggatacagctgtgagtgcgtt
cctggatatcacggagtcaactgtagtaaggagataaacgagtgtctgtctcaaccctgt
cagaacggaggaacctgcatcgacctcatcaacacgtacaaatgctcctgtccgcgggga
acacaaggtgttcactgtgagattgatgtcgatgactgttctccggccgtggatctgtta
accggtgagccgcactgttttaacggcggccgctgtgttgaccgcgttggaggttacggc
tgcgtgtgtccggctgggtttgtgggcgagcgctgcgagggcgatgtcaatgagtgcctg
tctgacccctgtgaccccaacggatcctacaactgcgtacagcttatcaacgacttccgc
tgcgaatgccgtacaggatacaccggcaagcgctgtgaaactgtgttcaacggttgcaag
gacacaccatgcaaaaatggaggaacatgtgctgtagcgagcaacaccaaacacggatac
atctgcaagtgtcagccgggttactctggctcctcctgcgaatatgacgcccagtcctgc
ggctccctgcgctgtcgtaacggtgctacctgtgtctcaggacacctgagtccccgctgt
ctctgcctgccgggcttcagcggacacgagtgccaaacacgcatggactcgccctgcctc
aacaacccctgctataacggcggcacctgccaacccatcaacgacgccccgttcttccgc
tgctcctgtccagccaacttcaacggactcctctgccacatccttgactactccttcaaa
ggagggcagggccgagacatcgccccgccggaggtggagatccgatgtgaaatcgctcag
tgcgaaggcaggggcggaaacgccatctgtgatacccagtgtaatagtcacgagtgcgga
tgggacggcggcgactgctctctgaatttcgatgacccgtggcagaactgtagcaccgcc
cttcagtgctggaggtacttcaacgacggcaaatgtgacgagcagtgcgccaacgctggc
tgcctgtatgatggcttcgactgccaaagactggaggggcagtgcaatccgctgtacgat
cagtactgtagggatcactatgcagatggtcactgcgatcagggctgtaataacgctgag
tgtgaatgggacggtctggactgcgccgatgacgttcctcagaaactggccgtggggagt
ctggttctagtggtccacatcccaccagacgatcttcacaaccgctcctcgtctttcctc
cgcgagctgagtggactgctgcataccaacgtggtgttccgccgcgacgctaacggagag
ccgctcattttcccgtactacggcaacgagcacgagctgagcaagcacaagcgctctgat
tggacggacccggcccagctgctgcaccgcgccaggaggagcctgacggccttcatgaag
ccccgcctccgacgagaactcgatcagatggagatcaaagggtctatcgtctatctagag
atcgacaaccgtcagtgttaccagcagtctgacgagtgtttccagagcgcgacggatgtg
gcggctttcctcggagcgctggcctctagcgggaatctcaatgttccttacatcatcgag
gccgtcacaagtgagtgccacatttatgccaaaatcactgttattttcctttcaagtaac
aaaaatattaacgataatacccttggtttgcaggaggagacgccacttttcctggctgct
cgtgagggaagttacgaaaccgctaaagtcctgcttgatcacctggccaaccgtgagatc
gcggatcacctagaccagcttccacgcgacatcgcgcaggagcgcatgcaccacgacatc
gtccgtctgttagaggaatacaacctggtccagaatcccgcgctgcctctatcgccccct
ctctgctcgcccaacacctacctgggcatcaaacccagcccgggcggcgccaacaacaac
aacacggccaagaaagcgcggaaaccgagcagtaaaggcgtaggagggaaggacggcgga
aaagacatgagaatgaaaaagaaaaaggccggagagggcaaaaatggaggcattatggaa
gtgggcgtcctctcgcctgtcgattcgctggaatcgccccacggttacctgtcagacgtc
tcgtccccgcctctgatgacatcaccgtttcaacagtccccgcccatcactttgaatcag
ctccaaggattggccgacacccacatgggcggagctcttcagagcttagggaagccattt
gactccgcccttcctcctcgcttatcccatctgccagtggctaacaatggaggcggagct
caaacggcggcgtgcgattggctgcaaagggtgcagcaacagcaggcaggcttcacaacc
ctgatacccacaatgctctctgccaccaatatgccacaggtcatgggctatcccacaatg
caaagcagccacctcggcatgccgtcgcacatgattcccaaccacgcccatcagaatagg
gtgcctatgcggcaccaaaacagcgccgcctctggccacgcccacgtctctcatcacttc
ctaggtgacttaactgggctggatcttcagtccggctcaggacacgcccccatccagacc
atcctaccgcaggagagccagcgcatggctccgcccatttctagcacacagtttctgact
ccgccttctcagcatagctattccaaccctatggacaacactcccagtcaccagccacag
gttcccgaccacccattcctcacaccctcccctggatctcccgaccaatggtcaagctcg
tctccacattccaacttgtctgattggtcagagggcatctcgagcccgcccaccagtatg
cagatgaaccatatcccagaagccttcaagtag
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