Sinocyclocheilus grahami (golden-line barbel): 107597863
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Entry
107597863 CDS
T04918
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04020
Calcium signaling pathway
sgh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107597863
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107597863
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107597863
Ion channels [BR:
sgh04040
]
Ligand-gated channels
Glutamate (ionotropic)
107597863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
DUF3663
NYN
Motif
Other DBs
NCBI-GeneID:
107597863
NCBI-ProteinID:
XP_016144544
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MRLVLFAFLISCSCARGGCEPKTVNIGAVLSQKRYEQVFKDAVTQANNIYGRDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSA
SEDEAAAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVVMNTQRKIIWPGGETEKPKGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEFTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRSQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSIS
TNLASNIKRRRSSKDTPYPTDIAGQLNLSDPSVSTVV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctgttcgccttcctcatctcgtgctcctgtgcgagaggcggatgcgaa
cccaagactgtgaatatcggggctgtcctgagccagaagagatatgaacaagtgttcaaa
gacgctgtcacccaagccaacaatatatacggcagagataagttcaagatgaacgctatt
tctgtcacccataagccaaacgcaatccagatggcactctccgtatgtgaggatctcatc
tctaaccaggtgtatgcgatcttggtgagccacccaccccagtccaacgaccatctaact
cccactccggtgtcctacacagctggtttttaccgtatccctgtagtgggcctcaccacc
cgcatgtccatctactctgataagagcatccacctctccttcctgcgcacggtgccaccc
tattcccaccaagcccaagtgtggtttgacatgatgcgtgagttccagtggaatcacata
attctgattgtcagtgatgaccacgagggcagagcggcacagaaaagactggaaaccctg
ctggaggaaagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tttgacaacaagcgaggacccaaggcagagaaagtgctcctgttcagccaagacacaaat
ctgacagctctgctccaggaagccaaagagctagaggcccgagttatcatcctgtctgca
agtgaagacgaagccgcagccatttacaaagcagcgcgccagctcaatatgacaggctct
ggttatgtgtggctggttggagaaagggagatgtctggtaaagcactgagtgaagcccca
gatggcttgctcggccttcagcttatcaatggcaagaacgagtctgcacacatctacgat
gccgtggctgtggtggcccagtccattcaggagctctttgagaaggagaatatcacagag
cctcctcgaggctgtgttggcaatacaaacatctggaagactggcccactcttcaaacga
gtgctgatgtcatccaagtatccagatggcctgacaggccgcgtggagtttaatgatgac
ggagacaggaggttcgcccactacagcattctgaactaccagaaaacccggctggtgcaa
gtgggcgtctacaatggctcgcaagttgtaatgaacactcagaggaagattatttggcca
ggaggagagactgaaaagccaaaagggtatcagatgtcaacgagattaaagattgtcacc
attcatcaagagccctttgtgtatgtgaaaccaacgttacgagatggaacatgtaaggaa
gagttcactgtaaatggagtcctgatcaaaaaagtgatctgcactggccccaatgagacc
attccaggtcgccccatagtgcctcagtgctgctatgggttctgcattgaccttttgatc
aaacttgcaatgacaatgaacttcacctatgaagtgcatctagtggctgatggcaaattt
ggcactcaggagcgtgtaaataacagcaacaagaaggagtggaatggcatgatgggagag
ctcctgagtggcttggcagacatgatcgtggctccacttacaatcaacaatgaacgagcc
cagtatatagagttctcgaaaccgttcaagtaccaggggctcacaatacttgtcaaaaag
gaaataccgcgcagtacactggactcgttcatgcagccttttcagagcactctgtggtta
ctggtgggtctatcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccgtttggaaggtttaaagtaaatagtgaagaggaagaagaagatgccctcaccttatcc
tctgctatgtggttctcctggggtgtacttctgaactccggcattggagaaggtgcccct
cggagcttttcagcaaggattttaggtatggtgtgggctggttttgctatgattatagtt
gcatcttatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagacaagttcatctacgccacagtg
aagcagagctctgtggacatttacttccggcgccaagttgagctaagcaccatgtaccgc
cacatggaaaagcacaactacgagagtgccgctgaagccatccaggccgtgcgagacaac
aaactccacgcgtttatatgggattcagcagtgttggagtttgaggcctcgcagaaatgt
gacctggtcaccacaggcgagctgttcttccgctctggattcggtatcgggatgcgtaaa
gatagcccgtggaagcaaaatgtctcactggccatcctcagttcccatgagaatggcttc
atggaggacttggataaaacctgggtccgttctcaggagtgtgactccagaagcaatgca
ccagccacactgactttcgagaatatggcaggcgtgtttatgttggtggctggtggcatc
gtcgccgggatcttcctcatcttcattgagattgcgtacaaacgacacaaggatgcacgc
aggaagcaaatgcagctggcttttgcagcagttaacgtatggaggaagaacttacaggat
aggaaaagtggtagagcagagccagaccccaaaaagaaagcctcttttaggtccatcagt
accaacctggcctccaacatcaagagacgtaggtcgtccaaagacacgccataccctacg
gacattgctggccaactcaacctgtcagacccctctgtgagcacagtggtgtga
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