Sinocyclocheilus grahami (golden-line barbel): 107600932
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Entry
107600932 CDS
T04918
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04020
Calcium signaling pathway
sgh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107600932
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107600932
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107600932
Ion channels [BR:
sgh04040
]
Ligand-gated channels
Glutamate (ionotropic)
107600932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
SIP
Motif
Other DBs
NCBI-GeneID:
107600932
NCBI-ProteinID:
XP_016148407
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MRLLLLAALFSCSCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKAEKVLQFNQETNLTALLLEAKELEARVIILSASEEDAAAVYKTARFLNMTGSG
YVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISDAVAVVAQSIQELFEKENITEP
PRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDDGDRKYAHYSILNYQKSRLIQV
GIYNGTQVVMNKQRKIIWPGGETERPRGFQMSTRLKIVTIHQEPFVYVKPTTLEGTCKEE
YTPNGVLIKKVICTGPNETIPGNTSGRPIVPQCCYGFCVDLLIKLAMTMNFTYEVHLVAD
GKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTIL
VKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDAL
TLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPE
ERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAV
RDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHE
NGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIAAGIFLIFIEIAYKRHK
DARRKQMQLAFAAVNVWRKNLQPSSSVETQDDRKSGRADSDPKKKPSFRSISTTLASSIK
RRRSSKDTVRRLRNGISFYSAGLSSSFCVCLSLVLFFCSSLCIYFLLS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttctgctggccgcgttattctcctgctcctgcgtgcggggcggctgcgag
cccaagattgtgaacatcggagccgtcctgagccagaagagatacgagcaggtgttcaag
gatgcggtcactcaggcgaaccaggtgtacggaagggataaattcaagttgaccgccatc
tctgtcactcacaaagcgaatgcgattcagatggcgctgtctgtgtgtgaggatctcatt
tccagtcaggtgtacgccatcctggtgagccatccaccacagtccaatgaccatctgacg
cccactccggtctcctacaccgcaggattttaccgaatacctgtagtagggcttaccacc
aggatgtccatttactcagacaagagcatccatctctcattcctccgcacagttccaccc
tattcccaccaggcacatgtgtggtttgacatgatgcgggagttccgctggaatcacatc
attctaatcgtcagcgacgaccatgaaggcagagcggcacagaaaagactagaaactctt
ctggaggagagagagaccaaggccgagaaagtgcttcaattcaaccaagagactaactta
actgccctgcttctggaggccaaagagctggaggcccgagtgatcattctctctgccagc
gaggaagatgcagccgccgtgtacaaaacagcacgcttcctcaacatgacaggctcaggc
tatgtatggctggtcggggagcgtgagatgtccggtaaagctttgagcgaggcccctgac
gggctgattggcctccagctcatcaatggtaagaatgaatcggcgcacatcagtgatgcc
gttgctgtcgtagcccagtccatccaagagctctttgagaaagagaacatcacagaacct
ccaaggggttgtgtgggcaataccaacatctggaagaccgggccactttttaaaagggta
ctgatgtcttccaagtacccagagggcctaacaggacgcgttgagttcaatgatgacggt
gacagaaaatacgctcattacagcattctcaactaccagaagagcagactgattcaagtc
ggcatttacaatggaacacaagtggtgatgaataaacagaggaagattatttggcctgga
ggtgaaacagaaagaccgagaggattccagatgtctactcgattaaagatagtgaccatt
catcaggaaccctttgtgtatgtgaagccaactacgctggaagggacctgcaaggaagag
tacacacctaatggggtcttaattaaaaaggtgatctgcactggaccaaatgagaccatc
ccaggtaacacatcaggacgcccaattgttccccagtgttgctacggattctgcgttgac
cttctgatcaaattggcaatgaccatgaacttcacctatgaagtacacctggtggcagat
gggaaattcggaacacaagaaagggtaaataacagtaacaagaaggaatggaatggtatg
atgggcgagctcctgggtggccttgctgatatgatcgttgcacccttgacgatcaacaat
gaacgagcccagtacatagaattctccaagcctttcaaataccagggactgactatcctt
gttaaaaaggaaatacctcgcagtacactggactcattcatgcagccattccagagcaca
ctgtggctactggtgggtctatcggtgcatgtggtggcggtgatgctttacctactagac
cggttcagcccatttggaaggtttaaagtaaacagtgaagaagaagaggaggatgccctc
accttatcttcagctatgtggttttcctggggcgtcttgttgaactctggaattggagaa
ggtgccccacgtagtttttcagcgagaatcttaggaatggtgtgggctggctttgctatg
attatagtagcatcctatactgccaacctggctgccttcctggtgttggaccggcctgag
gagcgcatcaccggcatcaatgacccaaggctaaggaacccatcagacaagttcatctat
gccacagtgaagcaaagttcggtggatatttacttccggcgacaagttgagctgagcacc
atgtaccgccacatggagaagcacaactacgaaagcgccgctgaagccatccaggctgtt
cgggacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcg
cagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcataggc
atgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagttcccatgag
aatggcttcatggaggacctagataaaacctgggtgagataccaggagtgtgactcaagg
agcaatgccccagccacactcacctttgagaatatggcaggtgtcttcatgctagttgct
ggaggcattgcagctgggatcttcctcattttcatcgagattgcatataagcgccataaa
gacgcccgcaggaagcagatgcagctagcctttgcggccgtcaatgtttggaggaagaac
ctacagccctcttcctctgtagagactcaggatgataggaaaagtggtagagcagacagc
gacccaaaaaagaaaccctcttttaggtccatcagtaccaccctggcctccagcatcaag
agacgtaggtcctccaaagacacggtaaggaggttaaggaatggcatctctttttactcg
gccggtctctcttcctctttctgcgtctgtctttctctcgtcctattcttctgctcctct
ctctgtatctactttcttctgtcttaa
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