Shewanella glacialimarina: FJ709_12760
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Entry
FJ709_12760 CDS
T07885
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00730
Thiamine metabolism
sgla01100
Metabolic pathways
sgla01240
Biosynthesis of cofactors
sgla04122
Sulfur relay system
Module
sgla_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FJ709_12760 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
FJ709_12760 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgla03016
]
FJ709_12760 (thiI)
Enzymes [BR:
sgla01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
FJ709_12760 (thiI)
Transfer RNA biogenesis [BR:
sgla03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
FJ709_12760 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
UCX05279
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All DBs
Position
complement(2940979..2942433)
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKSVRLRFTKMLETNIRNVLKKVDEEANVLRLFDRLIVKVPEDKPE
LQDIFGQRLACIPGIAHVVQVSEYPFDTIDSIYQLALPRYRDEIAGKTFCVRVKRTGNHD
FNSIEVERYVGGGLNQHADALGVKLNNPDVTVNLEIDGNKVYLVERRIEGLGGFPMATQE
DVLSLISGGFDSGVSSFQFIKKGSRTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVR
FITVPFEPVVEQILERIDSGQMGVILKRVMMRVAARIAEKFKIQGLVTGESLGQVSSQTL
TNLNVIDRCTDMLIMRPLIAMDKQDIINQSRLIGTEDFAKTMPEYCGVISQKPTVKAVLS
KIEAEELKFDEDLIERIVYSAKVMDIRDIETEMNQQITETETVTDIASGEIVIDVRAPEE
EERKPLSIEGVEITAIPFFKLATKFAELDKSKTYLLYCDRGVMSKLQALYLIEQGYQNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagttataccctgaaatcatgatgaagagtaaatcggtaagatta
cggtttactaaaatgctagaaacgaatattcgaaatgtacttaaaaaagtcgacgaagag
gctaatgtgctacgtttatttgaccggctcatcgtcaaggtacctgaagataaaccagaa
ttgcaggacatatttgggcaacgcttagcgtgtattcctggtattgcgcatgtagtgcaa
gttagcgagtatccgtttgatactattgatagcatttaccagttagccttaccccggtat
cgtgatgaaattgccggtaaaacattttgtgtacgggtaaaacgtactggaaaccatgat
tttaattcgatcgaggttgagcgttatgttggcggtggcttaaatcaacatgctgatgcc
ttgggcgtaaaactgaataatccagatgttactgttaatcttgaaattgatggaaataaa
gtttatttggttgagcgtcgtatcgaaggtttaggtggttttccaatggcaacccaagag
gatgtgttatcacttatctccggtgggtttgactctggtgtatcaagttttcaatttatt
aaaaagggttcgcgtacccattattgcttcttcaacttgggcggcgcacagcatgagata
ggcgttaaacaagttgcctatcatttatggaaaacctacggcgagtcacataaggtacgt
tttattaccgtgccgtttgagccagttgtagaacaaattttagaaagaatagacagtggg
caaatgggcgttattttaaagcgtgtgatgatgcgagtagctgcgcgtattgccgaaaaa
tttaaaattcagggtttggtgacaggtgaaagtttaggtcaagtgtctagccaaaccttg
accaatttgaatgttatagaccgctgtactgacatgttaattatgcgtccactgatagcc
atggacaaacaggatatcatcaatcaaagtcgcttaattggcacagaggattttgctaag
acaatgcctgaatactgcggtgttatctctcaaaaaccgacggtaaaagcagtgttatct
aaaattgaagctgaagaattaaagtttgatgaagatcttatcgaacgtatcgtttattca
gctaaagtgatggatattagagatattgaaaccgaaatgaatcaacaaatcactgaaaca
gaaacggtaactgatattgcatctggcgaaatagtgattgatgtgcgcgctccagaagaa
gaagagcgtaagccattatctatcgaaggcgtagagattacagcaattccattctttaag
ttggcaacaaaatttgctgagttagataagagcaaaacctacctattatattgtgaccgc
ggtgtgatgagtaagttacaagccttgtatttaattgagcaaggctatcagaatgtaaaa
gtttatcgtccataa
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