Streptomyces gobiensis: test1122_21130
Help
Entry
test1122_21130 CDS
T08145
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sgob
Streptomyces gobiensis
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgob03009
]
test1122_21130 (rimO)
Enzymes [BR:
sgob01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
test1122_21130 (rimO)
Ribosome biogenesis [BR:
sgob03009
]
Prokaryotic type
ribosomal protein modification factors
test1122_21130 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UGY93966
LinkDB
All DBs
Position
4527814..4529319
Genome browser
AA seq
501 aa
AA seq
DB search
MPERRTVALVTLGCARNEVDSEELAGRLAADGWDLVEDASDADVAVVNTCGFVEAAKKDS
VDALLEANDLKDQGKTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYTDISGRLQTIL
SGGVHAPHTPRDRRKLLPISPAERQHAEVALPGHGDLAPAPADLPDGVAPASGPRAPLRR
RLESSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAGQGVKEIMLVSE
NNTSYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLIDVLTSTEKVAPYFD
LSFQHSAPGVLRAMRRFGDTDSFLELLDTIRTKAPQAGIRSNFIVGFPGETEDDLAELER
FLTGARLDAIGVFGYSDEDGTEAATYQDKTDPEVVAERLAHIGRLAEELTAQRAEERLSE
TLSVLVESVESVDTEAAGTAGTAGGAVLGRAAHQAPETDGQTLLTSADSMNLAPGRMVEA
KVVATEGVDLIAEPLGEEAGR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgctctcgtcacacttggctgcgcccgtaacgaggtggac
tcggaggagctggcaggccgtttggcggcggatggctgggatctcgtcgaggacgcctcg
gacgccgacgtcgccgtcgtcaacacctgtggcttcgtcgaggccgccaagaaggactcc
gttgacgccctgctcgaggcgaacgacctcaaggaccagggcaagacccaggccgtggtg
gctgtgggctgtatggccgagcggtacggcaaggagctcgccgaggcactgcccgaagcc
gacggtgtgctcggcttcgacgactacaccgacatctccggccggctccagaccatcctc
tccggcggtgtgcacgccccgcacaccccacgtgaccggcgcaagctgctcccgatcagc
ccggccgagcgccagcacgccgaagtggcgctgcccggacacggggacctggcccccgcg
ccggccgacctgccggacggtgtcgcccccgcttccggcccgcgcgccccgctgcgccgc
cgcctggagtccagccccgtcgcctcggtcaagctcgcctccggctgtgaccggcggtgc
tccttctgtgccattccgtccttccgcggctccttcatctcccgccgcccctccgacgta
ctgggcgagacccgctggctggccgggcagggggtcaaggagatcatgctggtctccgag
aacaacacctcctacggcaaggacctcggcgatatccggctgctggagaccctgctgccc
gaactggcggccgtcgacggcatcgagcgggtccgggtcagctacctccagcctgccgag
atgcgccctggcctgatcgacgtactcacctccaccgagaaggtcgccccctacttcgac
ctgtccttccagcactccgcccccggtgtgctgcgcgcgatgcgccgcttcggggacacc
gacagcttcctggagctgctggacaccatccgtacgaaggcaccgcaggccggcatccgg
tcgaacttcatcgtgggcttccccggggagaccgaggacgatctggccgagctggagcgt
ttcctcaccggcgcgcggctggacgccatcggggtgttcggctactcggacgaggacggt
accgaggcagccacctaccaggacaagaccgacccggaggtcgtcgccgagcgtctggcg
cacatcgggcggctcgccgaggagctgaccgcgcagcgcgctgaggagcggctgagcgag
acgctgtccgtactggtcgaatccgtcgaatccgtcgacacggaggctgccgggactgcc
gggaccgctgggggagccgtgctgggccgggccgcgcaccaggcgccggaaaccgatggc
cagaccctcctcaccagcgctgacagcatgaacctcgctcccggacgtatggtcgaagcc
aaggtggtggcgacggagggcgtggatctgatcgctgaaccactgggtgaggaggcgggc
agatga
DBGET
integrated database retrieval system
