KEGG   Sporisorium graminicola: EX895_002897
Entry
EX895_002897      CDS       T09331                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
sgra  Sporisorium graminicola
Pathway
sgra03020  RNA polymerase
sgra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sgra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EX895_002897
  09124 Replication and repair
   03420 Nucleotide excision repair
    EX895_002897
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgra03021]
    EX895_002897
   03400 DNA repair and recombination proteins [BR:sgra03400]
    EX895_002897
Transcription machinery [BR:sgra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     EX895_002897
DNA repair and recombination proteins [BR:sgra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EX895_002897
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C zf-TFIIB
Other DBs
NCBI-GeneID: 40725792
NCBI-ProteinID: XP_029740172
LinkDB
Position
SGRAM_18:270142..270543
AA seq 133 aa
MSSLHFCAECNNLLYPEVDRTNHVLLYACRNCNYQQESRESLVYRNDLMSVTKEQPGIVD
NLMKDPTLRRTHDLNCPNCGHGEAVLFQDQSKRIMNRMILFYVCCRCNHLFRDPAQPAPS
AGPGQVWNDRKKK
NT seq 402 nt   +upstreamnt  +downstreamnt
atgtcgtcgctccacttctgtgcagagtgcaacaacctgctctaccccgaagtagaccgc
accaaccacgtgctcctctacgcctgtcgcaactgcaactaccagcaggaatcgcgcgaa
tcgctcgtctaccgaaatgacctcatgtccgtcaccaaagagcagccaggaatcgtggac
aacctgatgaaggaccccacgctgcgcaggacgcacgacttgaactgccccaactgcggc
cacggtgaggcggtgctgttccaggatcagagcaagaggatcatgaacaggatgattttg
ttctatgtgtgttgtagatgcaaccacctgtttagggatcctgcgcagccggcgcctagt
gctggcccagggcaggtctggaatgatagaaagaagaagtag

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