Schistocerca gregaria (desert locust): 126323716
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Entry
126323716 CDS
T08688
Name
(RefSeq) uncharacterized protein LOC126323716
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03020
RNA polymerase
sgre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126323716
09124 Replication and repair
03420 Nucleotide excision repair
126323716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgre03021
]
126323716
03400 DNA repair and recombination proteins [BR:
sgre03400
]
126323716
Enzymes [BR:
sgre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126323716
Transcription machinery [BR:
sgre03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126323716
DNA repair and recombination proteins [BR:
sgre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126323716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
DUF1480
Motif
Other DBs
NCBI-GeneID:
126323716
NCBI-ProteinID:
XP_049850665
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MHMENSVRSSVPLKQIRQVQFSLLSPEEIEGMSVVEIKLPDYDDDQPKPQSLSDRRLGTI
TRDYKCETCLSDETECPGHFGHIELASPMYQYHCMSYILKVLRCVCYSCHKLLVDANDPK
FVMASKIVDPHDRFLAMYSLARLRRVCMSDQNKKEDEEDGMERKKPRILHNGCGKKQPKF
TRESFIIYQEFQEKDKSKEKKRLSAMEVYQILRGIRASEYELMGFDSRYAHPDWMVLTKF
PVPPPHMRPSVKSTGSMRGIDDLTFKLSDIIKVNNVLRTQKENGLPMHLQQEYEDVLQYH
LATYVNNEIPGMSQSKQRASGRPLKAIQQRIKGKEGRVRGNLMGKRVDFSARSVITPDPN
LMIDELGVPLKIAMKMTIPEVVTPLNMRRMQELVDNGADTYPGALFLISGHQTNQTLRWD
LRVKRNPVLKYGDVVERHLQNGDLVIFNRQPSLHKMSMMCHRIRVMPYQTFRLNLSVTTP
YNADFDGDEMNMHVPQSLESKAELLEIMAVPKQIITPKANRPVIGLVQDTLLGCSIFTSR
DVFLEKDMVMNLCMWLDDWNGKLPVPAVLKPKQLWTGKQLFSFVLPNVNLRSVSSQHPKD
FKGDITPGDTEVIVIQGQHLAGILDKKTLGTSEGGLVHVIWKDHGPEAAKAMLSTAQCVV
NYWLLHRGYTISISDTIADETIMQSINKIITETKGKLGDLIMQLQKNNLERSPGLTLMQN
FEKKVNKELNEATDKSGKQAQQSLSRGNNINNMVKSGSKGSTINISQIIACVGQQNVEGS
RIPFGFNKRTLPHFTKNDLGAESRGFVANSYLRGLTPQEFYFHTMGGREGLIDTAVKTSE
TGYIQRRLVKAMEDVAVQYDGTVRNSIGDIIQFVYGEDGMDSVGVESQKFDSMRMNNKEL
EKRFKYDFTDIHLSLGHNTLEDDKLELLRTDTETIAILDEEWKQIRYDREVLRHLFPTGH
DTWPLPINLVRLIITAQQMVEDREKRPSDLDPKEIVERVRHLCASLHVVPGMDEYAEEIR
ENATTLFAIHLRSTLGSKRVLQSYRLNRFAFNWLIGEIRRRFNQCLVHPGEMVGVVAAQS
IGEPATQMTLNTFHFAGYSGKNITLGVPRLRELINVAANPKTPGMTVYLPQDLDRDSVNS
AVQLIEYVVLRDIVKKTQIWYDPDPLNTVIEEDRALVSFNSMIYDDEVIEKVSPWLLRLE
FDRVVMEPKKELRMNHLKRLVNEWTNGESVCIVSNDNAEDLVMHIRIMKDPSDYDSDDRG
ADQDDGSSGDWDSDQEKGYQFMRALEQRMLEYPLCGIKGIGHVFMDQKPLPYFDPEGGYR
ESKQWVLETEGNNLLETIACPKVNPTLTYSNCIVEILQVLGIEGARNALLNEIRQILSFD
GGYVNHRHIALLVDSMTYRGHLMAITRHGINRRGTGPLMRCSFEETQDILTKAAIYAEND
PIRGVSENIMVGNTAPIGTGMFDLYLNDKLLKDAVVIQLNTHPSQASNFMDYLSFGFNEM
HSSKLSNVNLYDPTTTPVSSPTGNVMSPYVGALSPIPQNPTSPQSPSPGYGYSQSISNDV
YSSSPSFYAPGSPAYPHSFPSYSPTSPSSYSPTSPSSYPPTSPSYSPTSPSSYSPASPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYPHTSPYTSYPPTSPSRDSSSPAYSPSSSYSPTS
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgcatatggaaaattcggtgcgctctagcgtgcccttgaagcagataaggcaggtgcag
tttagcttgcttagcccagaagaaattgaggggatgtctgtggtggaaataaaacttccg
gattacgacgatgatcaacctaagcctcagagtttatctgaccgtcgtctggggaccata
actcgagattataaatgtgagacgtgtttgtcggacgaaacggaatgtccaggacacttt
ggccacattgaactggcgtcgcccatgtaccagtatcattgcatgtcctacattttgaag
gtgctgcgctgtgtgtgttacagctgccacaagctgttggtggacgcgaatgacccgaag
ttcgtaatggcgtcgaagatcgtggacccgcacgaccggtttttggcgatgtatagttta
gctaggctaaggagggtgtgcatgagcgatcaaaacaagaaagaggacgaggaggacggt
atggaaagaaagaagccgcggatattgcataatggatgtggaaagaagcagcctaagttc
actagagaaagtttcattatttaccaggaatttcaagagaaggacaagtctaaggagaag
aagaggttgtcggcgatggaggtgtatcagatattgcgtgggatcagggcatctgaatac
gagttgatggggtttgattctcgatatgcgcatccggattggatggtgctgacgaagttt
cctgtcccgccgcctcacatgcgtccttcggtgaagagcacggggtctatgcggggaatc
gatgacttgacgttcaagttgagtgacattattaaggtcaacaacgtcttgcgcactcaa
aaggagaatgggttgccgatgcaccttcagcaggagtacgaggacgtgctgcaatatcat
ttggctacttatgtcaacaacgagataccgggcatgtctcagtccaagcagcgagctagt
ggtcgaccgctgaaggctatccaacagcggattaaggggaaggaggggcgagttcgagga
aatttgatggggaagcgagtggatttcagcgctcgttcggtgattacgccggacccgaac
ttgatgattgacgagttgggcgttccgctgaagattgccatgaagatgacgattccggag
gtggtgactcccctgaacatgcgacggatgcaggaattagtggacaacggtgcggacacg
tatcctggcgctctgttcttgatttcgggccaccagaccaaccagactctccgatgggac
ttgagggtaaagcggaatccggttttgaagtacggagacgtcgtggagcgtcacttgcag
aatggggacttagtaattttcaaccgtcagccgtcgcttcacaaaatgtcgatgatgtgc
catcggattcgcgtgatgccctaccagacttttcgcctgaatttgtctgtgactaccccc
tataacgcggatttcgacggagacgagatgaacatgcacgtgccccaatctctcgagtcg
aaggcggagttgctggagatcatggcggttccgaagcagattatcacgccgaaggcgaac
cgtccggtgattgggttggtgcaggacacgctgttgggctgcagcatatttacgagccga
gacgtcttcttggagaaggacatggtgatgaacctgtgcatgtggctggacgattggaac
gggaagctccctgttccagctgtcctgaagccgaagcagttgtggacgggaaagcagctt
ttctccttcgtgttgccgaacgtgaatttgcggagcgtgtccagtcagcaccccaaggat
ttcaagggcgatatcactcctggggacacggaggtgatcgtgattcaaggccagcatctg
gccggaattctggacaagaagacgctgggtacgagcgagggcggtctggttcacgttatt
tggaaggaccacggccccgaggcggccaaggcaatgttgtcgaccgcccagtgcgtcgtg
aactactggctgctgcaccgcggatacacaatcagtatctccgacacgattgccgacgag
acgatcatgcagtcgatcaacaagatcatcacagagacgaagggtaagctgggcgatctg
atcatgcagctgcaaaagaacaacctggagcgcagtccgggcttgactttgatgcagaac
ttcgagaagaaagtgaacaaagagctgaatgaggcgacggacaagtccgggaagcaggcc
cagcagagcttgtctcgcgggaacaacatcaacaacatggtgaaaagtggctccaaggga
tcgacgataaacatatctcagattatcgcctgcgtcggccaacagaacgtagaggggtct
cgcattcctttcggattcaacaagcgaacgttgccccacttcaccaagaacgacttggga
gccgagagtcgtgggttcgtggccaactcctacttgcgcggtctgactcctcaggagttc
tactttcacacgatgggcggtcgcgagggtctcatcgacacggcggtgaagacttcagag
acggggtatattcagcgtcggctcgtcaaggccatggaggacgttgctgtccaatacgac
ggcacggtgcgaaactcgattggagacatcatccagttcgtgtacggcgaggatgggatg
gactccgtgggcgtcgagagccagaagttcgactccatgcggatgaacaacaaggagttg
gagaagcggttcaaatacgactttactgacatacatttgtctctgggtcacaacacgctc
gaggacgacaagctggagctgctacgaacggacacggagacgattgcgatcctggacgag
gaatggaagcagattcgatacgatcgcgaggtgctccgtcacctgttcccgaccgggcac
gatacgtggcccctgcccattaacttggtgaggttgattattacggctcagcagatggtg
gaggatcgagagaagcgcccgagcgacctggaccccaaggaaatcgtggagcgcgtgcgc
catttgtgcgccagtcttcacgtcgttccaggcatggacgagtatgcggaagaaattcgg
gaaaacgcgaccacgctgttcgcgattcacctccgatcgacgctggggtccaagcgcgtg
ttgcagagctaccgcctcaaccgctttgccttcaattggttgattggagagattcgacgt
cgattcaaccaatgtctggttcacccgggagagatggtcggagtcgtcgctgcccagtcc
ataggtgagcccgccactcaaatgacgctgaacacgtttcactttgccggctattctggc
aagaacattaccctcggggttcccagacttcgcgagctcatcaacgtcgctgccaacccg
aagacgcccggaatgaccgtctacctgcctcaggacctcgaccgagactccgtcaacagc
gccgtccagctcatcgagtacgtcgttttgcgcgacatcgtcaagaagacgcaaatctgg
tacgatccggatcctctcaacaccgtcattgaggaagaccgagcgcttgtgtccttcaac
agcatgatttacgacgacgaagttatcgagaaggtgtctccttggctcctgcggctcgaa
ttcgaccgcgttgtcatggagcctaaaaaagagctacgcatgaaccatttgaagcgactc
gtcaacgagtggaccaacggggaatccgtgtgcatcgtctccaacgacaacgccgaagac
ctcgtcatgcacatccgcatcatgaaagaccccagcgactatgactctgacgaccgcggc
gctgaccaagacgacggcagcagtggcgactgggatagcgatcaagaaaaaggataccag
ttcatgcgcgcgctcgagcaacgcatgctcgaatacccactctgcggcatcaaaggcatc
ggtcacgtctttatggaccagaagcccttgccctacttcgatccagaaggcggctatcgc
gaaagcaaacaatgggttctagagaccgaaggcaacaaccttctggaaaccatcgcctgc
cccaaagtcaaccccactctcacctactccaattgcatcgtcgaaatcctccaagtcctc
ggcattgagggcgccagaaatgcattgctcaacgaaatcagacaaatcctcagcttcgac
ggcggatatgtcaaccaccgccacatcgccctccttgtcgactctatgacctatcgcgga
cacctaatggccatcactcgacacggcatcaaccgacgaggcacgggaccactcatgcga
tgctcgttcgaagaaactcaagatattctcaccaaagctgccatctatgctgaaaacgac
cctattcgaggcgtttctgaaaacatcatggtcgggaacacggcaccaattggcaccggc
atgttcgatctctacctcaatgacaagctcttgaaagacgctgtcgtcattcaactcaat
acccacccctcccaagcatccaacttcatggactatttgtctttcggcttcaacgaaatg
cactccagcaaactatccaatgtaaacctatacgatcccactaccacgcccgtttcgtca
ccgactggtaatgtcatgtctccctacgtcggcgccttgtcacctatacctcagaatcca
acatcgcctcaaagtccttcacctggatatggatattcccaatcgatttcaaacgacgta
tattccagctctccttctttctatgcccccggatctccagcctaccctcattctttcccc
tcctactctcccacttccccatcttcttactcccctacctctccgtcatcctatccccct
acctccccatcttactcccccacctccccatcttcctattctcctgcatctccctcctat
tcccccacgtcaccatcctattcccccacgtcaccatcttattctcccacgtcaccatct
tattctcccacgtcaccatcttattctcccacgtctccctcctattcccctacgtctccc
tcctattcccccacgtctccctcctattctcccacgtctccctcctattcccccacgtct
ccctcctattctcccacgtctccctcctattctcccacgtccccctcctattcccccacg
tctccctcctattctcccacgtccccttcttactctcccacctctccctcttactctcct
acctctccctcttactctcccacttctccctcctactctcccacttctccctcttactct
cccacctctccctcttactcacccacctcaccgagttatccccatacatccccttataca
agctatccccctacctcgccatcccgcgactcctcctccccggcttactctccttcttca
tcttattcccccacttcctag
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integrated database retrieval system
