Solicola gregarius: L0C25_07535
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Entry
L0C25_07535 CDS
T09807
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
sgrg
Solicola gregarius
Pathway
sgrg00190
Oxidative phosphorylation
sgrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgrg00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
L0C25_07535
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0C25_07535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgrg03019
]
L0C25_07535
Enzymes [BR:
sgrg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
L0C25_07535
Messenger RNA biogenesis [BR:
sgrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L0C25_07535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UYM06918
UniProt:
A0AA46TKR0
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All DBs
Position
1507913..1510114
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AA seq
733 aa
AA seq
DB search
MPDDLAIESAVVDTTDAPVDTAPARESFDVEPPYDTAAGDLPDDRFLDRELSWLTFNERV
LELAEDPEQPLLDRVRFLSIFASNLDEFFMVRVAGLKRRIAAGVAVRAASGLRPRDVLES
GLRTSHDLMLRQGELFRTEIVPALTTAGIELVRWGDLTEAERTDASVVYSDRVYPVLTPL
AVDPAHPFPYISGLSLNLAVVIRNPETDKEHFARVKVPPIFSRWVEVAPERFVPLEDVIA
AHLDVLFPGMEVVAHHAFRVTRNEDLEVEEDDTENLLKALEQELLRRKFGPPVRLEVEDS
IDPEILDLLVKELGVTDAEVFRLPGPLDLRSLVEIADLDRSELKFEPYVPATHPDLSEVE
SASPVNMFAALARRDVLVQHPYDSFATSVQRFIEQAAADPRVLAIKLTLYRTSGDSPIVD
ALIDAAQAGKQVLVLVEIKARFDEQANIGWARKLEEAGCHVVYGLLGLKTHCKLALVVRD
EPSGLQRYAHIGTGNYNPKTARVYEDLGLLTANAEIADDLTDLFNNLSGYSRNTEYARLL
VAPSGVRDGLLDQIGYEVDHHRAGRPAYIRLKVNALVDETTIDALFEASRAGVPIDIVAR
GICALRPGVPGLSETIRVRSILGRFLEHSRVFWFAGGGDPRAWIGSADLMHRNLDRRVET
LVRIPSEEHVRELGSLLELAMADRTSAWHLAADGTWERRHLAADGTPLDDLQEMLIARAK
GRKADAAAAARRA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgacctcgccatcgagtccgccgttgtcgacaccaccgacgcacccgtcgac
accgcgccggccagggagtcgttcgatgtcgagccgccgtacgacaccgctgcgggcgac
ctgcccgacgacaggttcctcgaccgcgagctttcctggttgacgttcaacgaacgcgtc
ctcgagcttgccgaagatcccgagcagccgctgctcgaccgggtccggttcctctccatc
ttcgccagcaacctcgacgagttcttcatggtgcgcgtggcgggcctgaagcgtcgcatc
gccgccggcgtcgcggtacgcgcggccagcggactccgcccgcgcgacgtactcgagtcc
ggtctacgtacgagccacgacctgatgctgaggcagggcgagctgttccgcaccgagata
gtgcccgcactcaccacggccggaatcgagctggtgcgctggggcgacctgaccgaggcc
gagcgcacggacgcgagcgtcgtctacagcgatcgcgtgtaccccgtgctcacgccactg
gccgtcgaccccgcgcacccgttcccgtacatctcgggactgtctctcaacctcgcggtg
gtgatccgcaaccccgagacggacaaggaacacttcgcccgggtcaaggtgccgccgatc
ttctcccgctgggtggaggtcgcgcccgagcggttcgtacccctcgaggacgtcatcgcc
gcacacctcgacgtgctgttcccgggcatggaggtcgtcgcacaccacgcgttccgggtc
acccgcaacgaggacctcgaggtcgaggaggacgacaccgagaacctcctcaaggcactc
gagcaggagctgctccgccgcaagttcggcccgccggtacgcctcgaggtcgaagactcc
atcgacccggagatcctcgacctgctcgtcaaggagctcggcgtcaccgacgccgaggtg
ttccgcctcccgggtccgctcgacctccgcagcctggtggagatcgccgacctcgaccgc
tcggagctgaagttcgagccgtacgtacccgccacgcatccggatctctcggaggtcgag
tccgcgagccccgtcaacatgttcgccgccctcgcgcgtcgcgacgtgctcgtccagcac
ccgtacgactcgttcgcgacgagcgtccagcggttcatcgagcaggccgctgccgatccg
cgcgtactcgccatcaagctgaccctctaccggacgtccggcgactcccccatcgtcgac
gcgctgatcgatgccgcgcaggccggcaagcaggtgctcgtactcgtcgagatcaaggct
cgcttcgacgaacaggccaacatcggctgggcgcgcaagctcgaggaggccggatgccat
gtcgtgtacggcctgctcggactcaagacacactgcaagctcgcgctcgtcgtacgcgac
gagccctccggcctgcaacggtacgcacacatcggcaccggcaactacaacccgaagacc
gcacgcgtctacgaggatctcgggctgctcaccgcaaacgctgagatcgccgacgacctc
accgacctcttcaacaacctgtcgggctactcacgcaacaccgagtacgcgcggttgctg
gtcgctcccagcggcgtacgcgacgggctgctcgaccagatcggctacgaggtcgaccac
caccgcgcgggccggcccgcgtacatccggctgaaggtcaacgcgctcgtcgacgagacg
acgatcgacgcactgttcgaggcctcacgcgcgggagtaccgatcgacatcgtcgcccgg
ggcatctgcgcgctgcgcccgggcgtgcccgggttgtcggagaccatccgcgtacgcagc
atcctcggccggttcctcgagcacagccgggtgttctggttcgccggcggtggtgacccg
cgggcgtggatcggctctgccgacctgatgcatcgcaacctcgaccgccgggtcgagacg
ctcgttcgcatccccagcgaggaacacgtacgcgagctcggcagcctgctggagctcgcg
atggccgaccggacctccgcatggcatctcgcggccgacggcacgtgggagcgccggcac
ctcgcagccgacggcacgcccctcgacgacctccaggagatgctgatcgcgcgcgcgaag
ggccgcaaggccgacgccgcggccgcggcccggcgggcttga
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