Strigops habroptila (Kakapo): 115601914
Help
Entry
115601914 CDS
T08851
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shab02000
]
115601914 (SLC6A4)
Transporters [BR:
shab02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115601914 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
DUF3439
Motif
Other DBs
NCBI-GeneID:
115601914
NCBI-ProteinID:
XP_030328320
LinkDB
All DBs
Position
13
Genome browser
AA seq
670 aa
AA seq
DB search
MEKKATGKVTEPLTCKKDVSDCNKGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGDKGE
AAQISNGYSGGQSSAPCNGMGEVEDAQCTAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTTELPWTSC
TNAWNTGNCTNYFSKDNVSWSPHSISPAEEFYTRQVLQVHRSDGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCVTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHGWSKRRELFVLGLIIICFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPILLLFVTCSFLSSP
PELRLFDYNYPYWTTVVGYCIGSSSVIFIPIYMVYRLIITPGTFKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaggcaaagtgaccgagccactgacttgcaagaaagatgtctca
gactgtaacaaaggagaagactgtaaagagaatggacttctggtcaggaaccctaaatct
gccctgcggctggtggaggatggcaacaaagtccatcccagccagggggataaaggggag
gcagctcagatctcaaatggttattcaggggggcagagctctgctccctgcaatggcatg
ggagaggtggaggatgcgcagtgcactgccccagcagccaccaccaccactacgaccacc
acttccaccacctgtggagcagaaggccagcagcagctgatggagttggaagacagagag
acctggagtaaaaaaattgactttctactctctgtcattggctatgcagtggatctgggg
aatgtgtggagatttccttatatatgctatcagaacggaggaggagctttcctcattccc
tacacaattatggccatctttggagggattcctctcttctatatggaactagccctagga
cagtaccacaggaatgggtgtatttccatttggagaaaaatatgtcctatattcaaagga
attggctttgccatctgtataatagatctttacgtagcctcctattacaacaccattatg
gcttgggccttttactacctcatctcctccttcacaacggagctgccgtggactagctgc
acaaacgcctggaacacaggcaactgcacaaactacttcagcaaggacaatgtcagctgg
tcgcctcactccatctctcctgcagaagaattttatacccgccaagttctacaggtgcac
agatctgatgggctggatgacctggggggcattagctggcaattgactctctgtttattg
ctaatcttcaccattgtatacttcagcatctggaaaggagtcaaaacatctggcaaggtg
gtgtgggtgactgccacattcccttacatcatactctttatcctgctcgtgagaggtgca
acattgcctggggcatggagaggtgtcctctactacttgaaacctgactggcagaaactc
ctggccactgaggtttgggtggatgcagcagctcagatttttttctcccttggtccaggt
tttggggtcctgttggcttacgccagctacaacaaattccataacaactgctaccaagat
gctttggttaccagtaccgtgaactgtgtgactagttttgtgtctggatttgtcattttc
actgtgctgggatacatggcggagatgaggaatgaagatgtatcagaggttgccaaagat
actggacccagcctcctcttcatcacgtacgctgaggccatcgcaaacatgcctgcttcc
accttctttgccatcatcttcttcctgatgttgctcacactgggattagacagcacgttt
gcaggattagagggagtgattacgggagtcctggatgaattcccgcatggctggagcaaa
cgcagggaactgtttgtccttggtctgatcatcatttgtttcctggggtcattagcgacc
ctgacttttggaggtgcatatgtggtaaagctgtttgaggaatatgccacgggtccagct
gtcctcaccgttgtgtttctggaagcggttgctgtgtcctggttctatggcatcacccag
ttttgcaacgatgtgaaagaaatgctgggctctgccccaggctggtactggcgagtttgc
tgggtagcaattagtcccatcctcctcctgtttgtcacttgcagcttcttgtccagccct
cctgagctacggcttttcgattataactatccctactggaccacagtagtgggttattgc
ataggatcctcttcagtcatcttcattccaatctacatggtctatcggttgatcatcaca
ccaggaacatttaaggagcgtattctgaaaagcattactccagaaacagctacagaaatt
ccttttggagacatccgcatgaatgcagtataa
DBGET
integrated database retrieval system
