Strigops habroptila (Kakapo): 115601973
Help
Entry
115601973 CDS
T08851
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03440
Homologous recombination
shab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115601973 (BRIP1)
03460 Fanconi anemia pathway
115601973 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115601973 (BRIP1)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115601973 (BRIP1)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
115601973 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
115601973 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
115601973
NCBI-ProteinID:
XP_030328448
LinkDB
All DBs
Position
13
Genome browser
AA seq
1273 aa
AA seq
DB search
MSSDVSEYTIGGVKIMFPCKAYPSQLAMMNAILKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQSQYEKPLLTSSCEKEDRKPETSPLCRCTCHSQCKSNEAATSVNHGASCSITNCET
GSSVKPGSPLTTTECRENETLASKLSAKKRLSLRDNENDDFQVDRKRIRPLETEQQVRKR
HCVTKGVQLVDALEVYNQRKNGELIVHSERSVKPTTFSPKTSSGPCTECSCSSGKETDKD
ASNRKKKENGDQPFIPKIFFGTRTHKQISQITRELKRTAYSSVPMTILSSRDYTCIHPVV
SNTGNNRNEMCVELLEGKHGKSCLYYHGVHKLSEHHALQSAHRAYQAWDIEDLVSLGKKL
RACAYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDCARESMS
YGVTESQLRAAREELDFMVNNNIRQKDHEPLRAVCCSLTNWLKESSSQLVERGYETSCKV
WSGKEMLSILHKMGITDITFPILQKHLAAALEKEEKVSMFGREELIEIPVVSPATQMVLK
GLFMVLLYLFKDKSRFADDYRVALQQTYTWMNESQLDASDTSAFFTRPKRKKNLRQKTVV
HMLNFWCLNPAVAFSDLNDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVW
IGTIGVGPNGRKLCATFQHTETFEFQDEVGALLLSVCQTVAQGILCFLPSYKLLDKLKDR
WMHTGLWKNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGERDGALLIAVCRGKVSE
GLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKNTRGLLPGSQWYEIQAYRALNQ
ALGRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIQHHENFSSALESLRAFAVG
NQKSTDGSPECSSEFLCVPSNSKDLSQSLQQEVTIHLSPGVPVKSEEQNLVSEINFTTTI
SSLSPTASDQPSNIKATMKQSGQKIDVESHSHHVTPRRKHMGCTPQRPANKTEREEKKGW
TNADIMKEHCCFKPLTSTPLPVAKNCVSTATSKQKNVKRAGEVIDGVNQCQSSLISEHEP
SVPESCLETTDFSIKNVEPPLAEEHPCKLQLQVGPCSEFPSAGGKSELPVLNVAAEAEDE
DESIYFTPELYDDDVESEEENIRPLVPTCNTSENRIECGNTAVTDDLFAINTSETPSVAK
KMIDDNDGRSTSLHGIMQNEGNENSAVNNVEMSSEIEAKQIASQEMDTKKRKISLSRSRN
KGVSSFPSDNPST
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatgtgtcagaatatactattgggggagtgaagatcatgttcccttgtaag
gcttacccttcacaacttgctatgatgaatgctattcttaagggtttaaataacaggcag
cactgtttgttggagagccctacaggaagtggtaaaagcttggcattactttgttctgca
ctatcatggcagcagtctcagtatgagaaaccattgcttacatcgtcatgtgaaaaggaa
gacagaaagccagagacctcaccgctgtgtcgctgcacatgtcactcccagtgtaagagc
aatgaggcggcaacgagtgtgaatcatggtgcttcttgttctattactaattgtgaaaca
ggaagttctgtaaaacctggaagcccactaacaaccacagaatgtagggaaaatgaaaca
ctagcttcaaaattgtctgccaaaaaaaggttatcgctacgtgacaatgagaatgatgat
tttcaagtagacaggaaaaggattcgtcctttagaaactgagcagcaggttagaaaacgt
cattgtgttacaaaaggagtacagcttgttgatgctttagaagtttataatcagagaaaa
aatggagagctgattgttcactctgaaagaagtgtaaaacccaccactttttctcccaaa
acatcttctggcccttgcactgagtgttcatgttcttctggaaaagaaactgataaagat
gctagtaataggaagaagaaagaaaatggagatcagcctttcattcccaaaatatttttt
ggaacacgaacacacaagcaaatatcccagatcaccagagagttgaagagaacagcgtat
tccagtgtccccatgacaattctttctagccgggattatacttgtattcatccagtggta
tctaatactggtaataacaggaatgaaatgtgtgtagaattgctggaaggaaaacatggc
aagtcctgtctttactatcatggtgttcataaactcagtgaacaccatgcactacagtct
gcacacagagcgtatcaggcttgggacattgaagatctagtgagcctgggaaagaagctt
cgtgcctgtgcatattttgcagccagagaactcatggtgggagcagatattgtattttgt
ccttataattatctcctggacccgcagatacgggagagtatggaaattaacctaaaaggc
caagtagtcattttagatgaagcccataatattgaggactgtgctcgagagtcaatgagc
tatggtgttacagaaagtcaactcagagctgctcgagaagagctagatttcatggtcaac
aacaacatcagacagaaggatcatgagcccctacgggctgtgtgctgctctctgacaaac
tggttaaaggagagctctagtcaactggtagaaagagggtatgaaacttcttgtaaggtt
tggagtggaaaagaaatgctcagcattttgcacaaaatgggaataactgatattactttt
cccattttacagaaacatcttgctgctgccctggaaaaagaagaaaaagtatcgatgttc
ggtagagaggagcttattgagataccagttgtgagccctgccactcagatggtgctgaag
gggttattcatggttcttttatatctttttaaagataagagcaggtttgcagatgactac
agagttgctttacaacaaacttacacttggatgaatgaaagccaacttgatgcttcagat
acaagtgccttctttacacggcccaagcgtaaaaagaatttgcggcagaaaactgtagtc
cacatgcttaatttttggtgcttgaatcctgctgtggctttttcagacttaaatgatgtg
agaacaattgttctgacatctggtacgctctctccaatggattcattttcttcagagctt
ggtgtgaagttttctattcagttggaggcaaatcacgttattcggaactcacaggtttgg
attggcaccattggagtgggccctaatggtcggaagttgtgtgccacattccagcataca
gagacctttgagttccaagatgaggtgggagcacttctgctttcagtgtgtcaaacagtt
gcccaaggaattttgtgctttttgccatcctataagctgttggacaaattaaaagatcgc
tggatgcatactggcttatggaaaaacctggagctggtgaagacagtcattgcagagcct
caaggaggggcaaagagtgactttgatgagctgcttaaaatatactatgatgcaataaaa
tgtaaaggagaaagagatggagcactccttatagctgtttgcagaggaaaagttagcgaa
ggcttggatttctgtgatgagaatgcccgtgcagttataaccataggtattccgtttcca
aatgtgaaagacctccaggttgaattaaagaggaaatacaatgaccagcacaaaaataca
agaggccttttaccagggagtcagtggtatgaaattcaagcttacagggctctgaaccaa
gccctgggaaggtgtataagacataggaatgactggggtgctctgattttagttgatgac
cgcttccggaataaccctaataagtacataactggattatctaaatggattcgtcaacaa
atccaacaccatgaaaattttagtagtgcacttgaatccttgcgtgcatttgctgtagga
aatcagaaaagcactgatggttcaccagagtgcagcagtgaatttctctgtgtaccttca
aactcaaaagacctctcccaatcacttcagcaggaggtgactattcatctgtcaccaggt
gttcctgtgaaaagtgaagagcaaaacttggtttcagaaattaattttactacaaccatc
agctcacttagtcctacagcatcggatcagccaagcaacatcaaggcaacaatgaaacaa
agtggccagaaaattgatgttgagagtcattctcaccatgtaacaccaagaagaaaacat
atgggctgcacaccccaaaggccagcaaataaaactgagagagaagaaaagaagggttgg
actaatgctgatattatgaaagaacattgctgctttaaaccactaacttcaacacctttg
cctgtagccaagaactgtgtgtccacagctaccagcaaacagaagaatgtgaaaagggct
ggtgaagttattgatggtgtaaatcaatgccagtcatcattaatttcagaacatgaacca
agcgtaccagaatcatgtttggaaacaactgatttttcaattaaaaatgttgagcctcca
cttgctgaagagcatccttgtaagctacagcttcaagttgggccctgcagtgagtttcct
tcagcaggagggaaatctgaacttccagtgttaaatgtagctgcagaagctgaagatgag
gatgaaagtatctatttcacaccagaactttatgatgatgatgtagagtcagaggaagag
aatatcagaccactggttccaacctgtaatacaagtgagaatcggattgaatgtggcaac
accgcagtcactgatgatctttttgcaatcaacacctcagaaacaccaagtgtggctaaa
aaaatgattgatgataatgatggcagaagcacaagtttacatggaataatgcaaaatgag
gggaacgagaatagtgcagttaataatgtagagatgagtagtgagatagaagcaaagcag
atagcatctcaagagatggacaccaaaaaacggaaaatcagtctttccagatcacgaaat
aaaggtgtgtcatcttttccatcggacaatcccagcacatag
DBGET
integrated database retrieval system
