Strigops habroptila (Kakapo): 115605380
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Entry
115605380 CDS
T08851
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab00531
Glycosaminoglycan degradation
shab01100
Metabolic pathways
shab04142
Lysosome
Module
shab_M00076
Dermatan sulfate degradation
shab_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
115605380 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115605380 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
shab02042
]
115605380 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
shab00536
]
115605380 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
shab00537
]
115605380 (SPAM1)
Enzymes [BR:
shab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
115605380 (SPAM1)
Bacterial toxins [BR:
shab02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
115605380 (SPAM1)
Glycosaminoglycan binding proteins [BR:
shab00536
]
Heparan sulfate / Heparin
Enzymes
115605380 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
shab00537
]
Enzymes
115605380 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
115605380
NCBI-ProteinID:
XP_030335552
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All DBs
Position
3:complement(23180523..23194156)
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AA seq
587 aa
AA seq
DB search
METLRQIQSFGICVSYTYPIASGMVFATLLVSCCSSLNIRARPLVPKSPFLSIWNAPTEL
CTERTEVQLDMNFFSFIGSTLKTSTGQNITLFYPDRLGYYPYKNEVTGEALNGGLPQLSL
LENHLKKAKEDIQFYIPSDEQFGLAVIDWENWRPVWIRNWGSKDIYRQESIELVQQRDLS
LSEAEARIIAKMEFEAAAKSIMLESLKLGIEMKPNRLWGYYLYPDCYNYDYKQNPHNYTG
TCLDIEIERNNELNWLWEKSTALYPSIYLETALRSSRNAQLFVRNRVQEAIRISYVSNST
HPLPVFVYTRPVFTDVYEEYLSQDDLVNTIGESAALGASGIVIWGDMNLTQNKNTCRTLD
NYLRRTLTPYLINVTMAAKICSQVLCQDSGACARKKWNSSDYLHLNSENIVIQMTKDGKY
TLQGQPAFRDLQTFIEKFDCHCYAGHSCESRADINDIHYLHACISEDICIQISSNALSNI
EDSEEMILSNRTVFSFTSQSKVTLSTYPEIEDFQSTFGNNILNITIPEHSTVTSATRYDF
EANDTRTSSSSSSYKIRMFNLLNLILILRTLIQMTCESENILFSGCV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctaagacaaatacaaagttttggtatctgtgtttcctatacgtatcctata
gcatctggtatggtgtttgccactcttctagtttcttgctgctcatctctgaacataaga
gctcgtccacttgttcctaaatcacccttcctttctatctggaatgctcctacagagctt
tgtactgaaaggactgaagtacagctggacatgaattttttttctttcattggaagcaca
ctgaagacatccactgggcaaaacatcactcttttttatccagacaggcttggctactat
ccttacaaaaatgaagtcacaggagaggcgttaaatggaggactccctcaactctcactg
ctggagaatcatttaaagaaagccaaagaggacatccagttctatattccttcagatgaa
cagtttgggttggctgtcattgactgggaaaactggagacctgtgtggataaggaactgg
ggatcaaaagacatttatagacaggaatccattgaactggttcagcagagagacctcagt
ctatcagaagctgaagccaggattatagctaaaatggaatttgaagctgcagcaaaatca
attatgttggaatctttaaagctgggcatagaaatgaagccaaatcgtctgtggggatat
tacctttatccagactgttataactatgattacaaacaaaacccacataattacacaggg
acctgtttagatattgaaatagaaagaaataatgagctcaattggttgtgggagaaaagc
acagcactttatccatctatctatctagagacagccttaagatcttccagaaatgcccag
ctctttgttcgcaacagagttcaagaagccattagaatttcttatgtctctaattctact
caccctcttccagtttttgtatatacacgtccagtgttcacagatgtctatgaggaatat
ctctcccaggatgacctggtaaataccatcggagaatctgctgcactgggtgcttctgga
attgtgatctggggtgatatgaatttaacacaaaataagaacacctgcagaactctggac
aactaccttaggaggaccttgaccccatacctcatcaatgtcacaatggcagccaaaatc
tgcagccaggtattatgccaagactctggtgcctgcgcacggaaaaaatggaattcaagt
gactatcttcacttgaactctgagaatattgtcattcaaatgacaaaggatggaaaatac
actctacaagggcagccagcatttcgggatctgcaaacattcatagaaaaatttgattgc
cactgttatgcagggcacagttgtgaatccagagctgatataaatgacatccattacctc
catgcttgcatttcagaagatatttgcattcagatatcctcaaatgcactttctaacata
gaagactctgaagaaatgatcctgtctaacagaactgtattttcgtttacctctcagagt
aaggtgacattatctacatatcctgaaatagaagatttccaatctacttttggaaacaat
atactcaatataacaattccagaacatagcactgtcacatctgcgactagatatgacttc
gaagcaaatgatacccgtacttccagtagctcttcatcctataagataaggatgtttaat
ctgttaaatttaattctaattttgagaacattaatacaaatgacctgtgaaagtgagaat
attcttttctctggctgtgtttga
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