Strigops habroptila (Kakapo): 115611116
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Entry
115611116 CDS
T08851
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115611116 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115611116 (TPR)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115611116 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Imm70
Motif
Other DBs
NCBI-GeneID:
115611116
NCBI-ProteinID:
XP_030349373
LinkDB
All DBs
Position
8:38324377..38364959
Genome browser
AA seq
2377 aa
AA seq
DB search
MAAVLQQVLERAELSKLPKLVQAKLERFLADQQSEIDGLRARHERFKVDSEQQYFEVEKR
LAQSQERLVNGTQECQTLREELKKLHEQLKLLNEKNKELEAAQDRNAAIQSHLSREKEEL
EAEKRDLVRTSERRSQEVEHLNEDVKRLNEKLTEANTEKVKLQLKLDELQTSDVSMKYRE
KRLEQEKEHLQNQNAWLNTQLQAKTEELLHTAREKGNEILELKCNLENKKEEVSRMEEQV
NSLKQSQENLQKQVEDLLNKLKEAKEQQAGMEERFHSELNAHIKLSNLYKSAADDSEAKS
NELTGAVEELHKLLKEAGEATCLSDLILANKATQEHLAEVEESKAVMEKELREKISKLEK
ELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLLL
EKLENKRINKYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIQRLQED
ADKANKHASLLGRENQRLEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSE
VISQHLVSYRNIEELQQQNQRLLVALRELGEAKEKEEQETTSSKISELQNQLEEALNELE
KLRESRHHQLQLVESIVRQRDMFRILLAQTTGAIIPLQASGMLPEEMSLTSTPKRSNLPQ
AMSTPASVSMPESVETLEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTDLRS
QNAKISTQLEFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLRG
ANEKLAVAEVRAENLKKEKDILKMSDVRLTQQRDSLLVEQRGQNLLLANLRAIQGILEKS
ETDTKQRLNNQIEKLEREISQLKKKLESEVEQRHSLSKNQEVHILDLKRQLETETNRHIN
TKELLKNAQKETAMLKQQLNNTEAQLTSQSSQRAPGKGQPSTNENVDDLVSRLRQADEQV
NDLRERLKTTSSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEARLKESSEYQAQLEKNL
MESEKEKQELQEEKRKAIENMEQQLSELKKSLSTVQSEVQEALQRASTALNNEQQARRDC
QEQAKMASEAQNKYERELMLHAADVEALQAIKDQVSKNTAVRQQLEEAAQKAESELLECK
ASWEERERMIKDEASKLASRCEDLEKQNRLLHEQLESLSDKMVTSMKEAMPTAVNVSLNE
EGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNAEREK
VQVTAKTIAQHEELMKKTETMNVLIETNKMLREEKERLEQELQQIQAKVRKLEADILPLQ
ESNAELSEKSGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEANTKRI
QQMSEETGRLKAEIARTNASLTTSQNLVQSLKDEVTKIRTEKDTLQKELDAKVADIQEKV
KTITQVKKIGRRYKTQYEELKAQHDKMVAEASTQSFVEQQEEQVSLQEVQELKDTLSQAE
VKTKTLESQIESLQKSIAEKEAEVRNLQEQIIQLQSELAHFHQDLQEKTTQEEQLRQQIT
EKEEKTRKTLLAAKQKIAQLAGTKEQLTKENEEWKQKSSSLEEQKTELEVRMSALKSQYE
GRICRLERELREQQERHHEQRDEPPESTNKVPEQQRQISLKSTPASGERGIASTSDPPTA
NIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQE
AMQSEGPVEHVPVFGSASGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIE
PANQEPSPTIVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRPREEEEDNTVENSDQIS
EETVDVPLPKKLRNMQRVGPEEEVTAEESTDGEVEAQTYNQDSQDSIGEGVTQGEYAPME
DSEETSQSIPIDLGPLQSDQQNTSSSQDGQSKRDDVIVIDSDDEDDDDEENEGEQEDYED
EEEEDEDDDEDTGMGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPGTETEESMGGGES
NQRAADSQNSGEGSTSAAESTFPHESSREQQPSSASERQAPRPPQSPRRPPHPLPPRLTI
HAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTD
GFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESG
GRSVPTTPLQVAAPVTVFTESASADASEHASQSVPMVTTSTGNLSTTTEAGVGDDGDEVF
AEAESEGITSEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSNQPKPFRRVR
LQPPTLRTGVRGRQFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgttgcagcaggtcctggagcgggccgagctctccaagctgcccaagctg
gtacaggcgaagctggagcgcttcctcgccgatcagcagagcgagatcgatgggttgcga
gccaggcatgagcgcttcaaagtggacagtgaacaacagtactttgaagtagaaaagcgc
ctggctcaaagtcaggagaggcttgtaaatgggacacaagaatgtcaaactctgcgtgag
gagcttaaaaaacttcatgaacagttgaagttactgaatgagaaaaataaagagcttgaa
gctgctcaggatcgtaatgcagccattcagagccatttaagtagagaaaaagaagaactg
gaagctgaaaagagagatttggttcgaacaagtgaaagacgatctcaagaagttgaacat
ttaaatgaggatgttaaacgcttaaatgaaaagcttacagaagcaaacacagaaaaggtg
aaacttcagttgaagttggatgaacttcaaacatcagatgtttccatgaagtaccgtgag
aaaaggttggagcaagaaaaggaacatctacagaatcagaatgcgtggctgaatactcag
ttgcaagccaaaacagaggaacttctacatactgccagggagaaaggcaatgaaatcttg
gagcttaaatgtaatctggagaacaagaaggaggaggtttcgagaatggaggaacaggta
aacagcttaaaacagtcacaggaaaatcttcagaagcaagtggaagaccttttgaataaa
ctgaaggaggcaaaagagcagcaagctggtatggaggaaagattccacagtgaactgaat
gcccacataaaattatccaatttgtataagagtgctgctgatgactcagaggcaaagagc
aatgaactgacaggagcagtagaagagctgcacaagctcctgaaggaagcaggtgaagca
acctgcttgtctgatttaattttagccaataaagccacccaggagcatttggctgaggtg
gaagagtcaaaagctgtaatggaaaaagaactgagagagaagatcagtaaactggaaaag
gagctggagaatgctaatgatttactgtccgctacaaagcgcaaaggagccatattgtct
gaggaggaactggcagctatgtctcccactgctgcagcagtagctaaagtagtcaagcct
ggaatgaaattaactgagctgtacaatgcctatgtagaaactcaggatcagttgcttttg
gaaaagctggagaataagagaatcaataaatatttggatgaaatagtgcaggaagtagaa
gccaaagcaccaatcttaaaacgtcagcgtgaagaatttgagcgttcacaaaaagctgtt
gctagtctgtctgcaaagcttgaacaagctatgaaggaaatccaacgattgcaggaggat
gctgataaagccaataagcatgcctctctgcttggaagagaaaaccagagactggaaata
caagtaaaagatctttcacagcagattcgtgtgcttttaatggaacttgaagaagctaga
ggcaatcatgtgattcgagatgaagaagtgagttctgctgacatcagtagctcttctgaa
gtgatatctcaacatctagtctcttacagaaatattgaagaacttcaacagcagaatcag
cgtctcttagtggctcttcgggagctgggagaggctaaagaaaaagaggagcaagaaaca
acatcatctaaaatttctgagcttcagaatcagcttgaggaagctctcaatgagctagaa
aaactgcgtgaatcacgtcatcatcagttgcagcttgttgagtctatagttcgtcagcgg
gatatgtttcgcatattgttggcacagaccacaggagctattattcctttgcaagcttca
ggtatgttaccagaggagatgtctcttacatctactccaaagcgctcaaatttacctcaa
gccatgtcaactcctgcttcggtatcaatgcctgagtcagtggagactctggaggctaag
gctgcacttaagcagttacaggaagtttttgagaactataaaaaagaaaaggcagagaat
gacaagttgctgaatgaacaaaatgaaaagcttcaggagcaggtcacggacttgaggtca
caaaatgcaaagatatccacacagctggagtttgcttccaaacgttatgaaatgctgcag
gataacgtcgaaggctatcgtcgagaaataacatctctgcatgaaagaaaccagaaactc
acagcaacaactcagaagcaagagcagataattaacactatgactcaagacctgagggga
gctaatgaaaaactggcggtggcagaggtgagagcagaaaacttaaaaaaagagaaagat
atcttgaagatgtcagatgtgcgtttgactcagcaacgtgactctctattagttgaacaa
agaggacagaatttgctgcttgcaaatttgcgagctattcagggaatactggagaagtct
gagacagatacaaaacaaaggctcaacaatcagatagaaaagctagagcgtgagatatct
cagctgaagaagaaactagaaagtgaggtggaacaaagacattccctttccaaaaatcaa
gaagttcatattcttgatcttaagaggcaactcgagactgagacaaaccgtcacattaac
acaaaggaacttttaaagaatgcccagaaggaaactgcaatgttgaaacagcagcttaac
aatacggaggctcagctaacatctcagtcatcacagagggctccagggaaaggtcagcct
agtacaaatgaaaatgtggatgatcttgtaagtcgactaagacaagctgacgaacaagtt
aatgacctgagagagagactcaagactacttctagtaatgtggaacaatacagagccatg
gttcttagtctagaggaatcccttaataaggaaaaacaagtgacagaggaagttcgtgca
acagttgaagctcgtctgaaggagtcttcagagtatcaagcacaactagaaaagaacctg
atggagtcagagaaagaaaagcaagaactgcaagaggagaagcgtaaagctatagagaac
atggaacaacagctatcggaactaaagaagagtttgtcaaccgtgcagtcagaagttcag
gaagctcttcagagagccagcacagctttaaataatgaacagcaagccagacgtgactgc
caggaacaagcaaagatggcttctgaagctcaaaataaatatgaacgggaattaatgctt
catgccgccgatgttgaagcattacaggctattaaagaccaagtttccaagaacacagca
gtaaggcagcaactagaggaagctgctcagaaagctgagtctgaattgttagagtgcaaa
gcctcctgggaagagagagagagaatgatcaaggatgaagcttcaaaacttgcatcccgc
tgtgaagatttggaaaaacaaaatagattattacatgaacagctggaaagtctgagtgat
aagatggtgacttctatgaaagaagccatgccaactgcagtaaatgtttctctcaatgaa
gaaggcaaatcccaggaacagatcttagaaattcttagatttatacgtcgagaaaaggag
attgcagaaactagatttgaggtggcccaggtggagagtttgcgttaccgtcagagagtg
gagcacctggaaagggaactccaggagctgcaagacagtctcaatgctgagagggagaag
gtgcaggtaacagcaaaaaccattgcacagcatgaagaattaatgaaaaaaactgagacc
atgaatgtactgatagaaaccaacaagatgctaagagaagagaaggagaggctagaacaa
gagctacaacaaattcaagcaaaggtacgcaagcttgaggcagacattctacctctacaa
gagtctaatgctgaactgagtgagaaaagtggaatgttgcaggcggagaaaaagctgttg
gaagaagatgtcaaacgctggaaagcccggactcagcatttattgagtcaacagaaggac
accgatctcgaagagtatcggaagctgctttcagagaaggaggcaaacacaaagcgtata
caacaaatgagtgaagaaacaggcaggcttaaagcagaaatagccagaactaatgcatcc
ttgactacaagccagaaccttgttcagagccttaaggatgaagtaactaaaataagaaca
gaaaaggatactttgcagaaagaactagatgctaaagtggctgacatacaagaaaaagtg
aaaactataacacaagtcaagaaaattgggcgcaggtacaagactcagtatgaggagctg
aaagcacagcatgataagatggttgctgaagcatcaactcagtcttttgtagaacagcaa
gaagaacaagtttctctccaggaagtacaagagctgaaagacactcttagtcaagctgaa
gtgaagacaaagactttggagagtcagattgaaagtttacaaaagtctatagcagaaaag
gaagctgaagttagaaatcttcaggagcagataatacagctacaatcagaacttgctcat
tttcatcaagatctgcaagagaagactacccaggaagaacagctcaggcaacagatcacc
gagaaggaagagaaaactaggaagaccttgcttgcggccaagcagaaaattgcacagtta
gctggtacaaaagaacagctaacaaaagaaaatgaagagtggaagcaaaagagcagctca
ttagaagagcagaagactgaactggaagtgcggatgagtgcacttaaatcacagtatgaa
ggtcgaatctgccgtctagaaagagagcttagagagcagcaagagcgacaccatgaacag
cgagatgagccaccagagtctacaaacaaggtcccagaacagcagaggcaaatctcactc
aagtctactccagcttcaggtgaaagaggaattgctagcacttcagatccaccaacagca
aatattaaaccaactcctgttgtgtcaactccaagtaaagtgactgctgctgcgatggct
gggaataagtctactccacgagccagtatccgtccaatggttactcctgctacagtcact
aatcctaccactacaccaacagccacagttatgcctacaacacaggtggaaactcaggaa
gctatgcaatcagaaggacctgtggagcacgttccagtctttggcagcgctagtgggtct
gtgcgttccaccagtcctaatgttcagacatctctctctcagcccatcttgactgttcag
cagcagacgcaagcaactgcttttgtgcagcccactcagcaaagtcatcctcagattgag
ccagctaatcaggagccatcccctaccattgtagaggttgtacagagctctcaaatagag
aggccctccacttctacagcagtgtttggcacagtttcagctaccccaagttcttcactg
tctaaacgtccacgagaggaagaggaggataacactgtggaaaactcagatcaaatttca
gaagaaacagtggatgttcctcttccaaagaaactgagaaacatgcagagagttggacca
gaggaggaagtgacagcagaagagagcactgatggcgaggtagaagctcaaacgtacaat
caagactcacaagactcaattggagaaggtgttactcagggagagtatgctcccatggag
gatagtgaagaaacttcccagtctatcccaatagatcttggacctcttcagtcagatcaa
cagaacacttcttcatctcaggatggtcaatccaagagagatgatgtcattgtaattgac
agtgacgatgaagatgatgatgatgaagaaaatgaaggcgagcaggaagactatgaggat
gaggaagaggaagatgaggatgatgatgaagacacagggatgggagatgaaggtgatgac
agtaatgaaggaactggtagtgctgatggtaatgacggatatgaagctgatgatgctgag
ggtgctgacggtacagatcctggaactgaaactgaggaaagcatgggaggaggtgaaagc
aaccagagggcagcagattctcaaaacagtggagaagggagtacaagtgctgcagagtcc
acttttcctcatgaaagttcaagagaacagcagccatcatctgcctcagagagacaagcc
cctcggcccccacagtcaccacgcagaccgccacatccactgcccccacgactaactatt
catgctcctcctcaagaactgggtcccccagtacagagaatccagatgactcgaagacag
tctgtggggcgtggacttcagctaactcctggtataggcgggatgcagcaacacttcttt
gatgatgaggacagaacagttccaagtacaccaactcttgtagttccacatcgtacagat
gggtttgcagaagccattcattcccctcaggtagctggtgttcctcgattcagatttgga
ccccctgaagatatgccacaaactagttcaagtcattctgatcttggtcagcttgcatca
caaggaggtttaggcatgtacgaaacacccctgttccttgctcatgaggaagaatcaggg
ggtcgtagtgttcccacaacaccattacaagtagcagcaccagtgacagtttttactgaa
agtgcatcagcggatgcttcagagcacgcttctcagtctgttccaatggttacaacatct
actggcaatctgtccaccactacagaggctggagtgggtgatgatggggatgaagttttt
gcagaggcagaatctgaaggaattacttcagaagcaggcttagaaattgatagccagcaa
gaagaagaatctgttcaagcatctgatgagtcagatcttccctcgactagtcaagatcca
ccttctagttcatctgcagacacaagcagtaatcagcctaagccgtttcggcgtgtcaga
ctccagccaccgacattaagaactggcgttcgtggtcgtcagttcaataggcagaggggt
gtaactcatgcaatgggaggcagaggaggcctgaacagggggaatatcagttaa
DBGET
integrated database retrieval system
