Strigops habroptila (Kakapo): 115613100
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Entry
115613100 CDS
T08851
Symbol
SPATA5L1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1 isoform X1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shab03009
]
115613100 (SPATA5L1)
Enzymes [BR:
shab01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
115613100 (SPATA5L1)
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
115613100 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_14
AAA_22
AAA_2
Rad17
AAA_33
Vps4_C
TIP49
RNA_helicase
AAA_7
DUF815
AAA_18
bpMoxR
DUF6497
TsaE
AAA_28
AAA_3
ABC_tran
nSTAND3
NTPase_1
IstB_IS21
AAA_17
Mg_chelatase
AAA_19
Motif
Other DBs
NCBI-GeneID:
115613100
NCBI-ProteinID:
XP_030354027
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All DBs
Position
9:complement(10946449..10955162)
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AA seq
757 aa
AA seq
DB search
MEGAVLKLLLLDPGDEGTQRCRVGPATLSFLGARIGAPLRISLPTGCCLCTVWPRHDLAD
GYLQVDLTCSTAGVTARGVTGLTLSVRQLQLLAYRRLTKAAVRVVLKSAALKKSTPRAVL
QEIIRELLRNIYVSLHYVVTVAPNLENPVMYIEILSVDSLVDEAGLITPQTSIKIKEVIT
YEWYRHLSEDTAKTSVAGLDDVGKSLKEIIDLPFRFPKTFKKLGLSVPNGVLLIGPPGVG
KTLMVKAVAKELGAYLLCISGPALYGSRPGESEENLRRVFEKAREMAHEGPTILFIDEID
SLCPKRGSSNNAPEDRIVAQLLTLLDGVGSEGKMVITAATNRPDALDPALRRPGRFDREV
VIGTPTLTQRRSILQLLTSGMPISTDVDLVKLAEMTTGYVGADLTALCREAAMQAVFRSS
LDSAETVINMADFQEAFKRTQPSSFRSAIGLTECKPVTWEQIGGLEDVKLKLKQSIEWPM
KFPQAFARMGLSPPKGILLYGPSGCAKTTLVKALATSCHCSFFSVSGADLFSPYVGDSEK
ILSQVFRQARANTPAIIFLDEIDSILGCRAHCKTSHGVSERVLSVLLNELDGIGLKVTER
RGSKLQLEGQCHEQSDEERKLEFQETLNKDFMVVAATNRPDMLDDALLRPGRLDKVIYIP
PPDLKGRLSILKICTEKIPLDPDVSLQDVAVLTDLFSGADIENLCKEAALLTLQENGLEA
TAVKHEHFVKSLRTVKPSLNMKDLEFYEKIYNQELAS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggagggggcagtcttaaagctgctcctcctggacccgggagatgaaggcacccagagg
tgtagggtgggacccgccacactgtccttcctgggagccaggatcggcgctccgctgagg
atctccctgcccacgggctgctgcttgtgcacggtgtggcccaggcacgacttggcggac
gggtacctgcaggttgatctgacctgcagcaccgccggtgtgacagcaaggggcgtgacg
ggcctcacgctgagtgtccgccagctgcagcttttggcgtaccgccggctgacaaaggca
gctgtgagagtggtccttaagagtgctgcgctgaaaaagtcgactcccagagcagtgttg
caggagataatcagagaactgctaagaaatatttatgtttcacttcattatgttgtaact
gttgccccaaatctcgaaaaccctgttatgtatattgaaatactgtctgtagactcttta
gtggatgaagctggtttgataaccccccaaacaagcataaagattaaggaggtgatcact
tacgaatggtacagacatttatcagaagacactgcaaaaacttcagttgcagggctagat
gatgtgggaaagtctttgaaagaaattattgatctgcctttccgctttccaaagactttt
aagaagctagggctttctgttcctaatggagtgctgttaatagggcccccgggtgtaggg
aaaacccttatggtgaaggcagtagccaaagaactgggtgcgtatctgttgtgcatcagt
ggcccagccctctatggttcaagaccaggagaaagtgaagagaatttacgaagagtcttt
gaaaaggccagagaaatggcacacgaaggcccaaccattctctttattgatgaaattgat
tctttatgcccaaagcgaggaagttcaaacaatgctcctgaagatcgtattgttgctcag
ttactaacactgctggatggtgttggtagtgagggtaaaatggtcattacagcagcaaca
aacaggcctgatgccttagaccctgcactgagaagacctgggagatttgacagagaggtt
gttattgggaccccaacacttacacaaagaagatccatcctgcagttgcttacatctggt
atgccaatttctacagatgttgatttggtgaaactggcagaaatgacaactgggtatgtt
ggagctgaccttacagcactctgcagagaagctgctatgcaggctgtgttccgcagctct
ttggattcagctgaaacagtgattaacatggcagatttccaagaagcttttaaaagaact
cagccatcctcttttcgaagtgcaattggactaacagagtgtaaacctgtcacttgggag
caaattggtggtcttgaagatgtgaaattaaagttaaaacagagtattgagtggcctatg
aaatttcctcaggcatttgctaggatgggcctgtctcctccaaagggtattcttctctat
gggccatcagggtgtgccaaaaccacgctggtgaaggctctggccacaagttgtcactgt
tcctttttctctgtaagtggtgctgacctcttctcaccttacgttggagattcagagaag
attttgtctcaggtttttcgccaagcaagagcaaatactccagcaataatattcctagat
gagattgactctatcttggggtgtcgggcacactgcaaaactagccacggtgtctcagag
cgggttctttctgttcttctcaatgagttggatggtattgggctgaaagtcacagaaaga
agaggaagcaaactgcagcttgagggtcaatgtcatgaacaaagtgatgaggaaagaaag
ctagagtttcaggaaactttgaacaaggatttcatggtagttgctgcaacaaatagacca
gatatgttggatgatgccttactgcgtcctggaagattagacaaggtcatctatattcca
cctccggatctgaagggaaggctttccattttgaaaatctgcacagaaaaaattccatta
gatcctgatgtgtcattacaagatgtggcagttctaacagacctcttctctggagctgat
attgaaaatctgtgcaaggaggctgctttgttgacgttgcaagagaatggacttgaagca
actgctgtaaaacacgagcattttgtaaaatctttgaggactgtaaaaccatccttaaac
atgaaagacttggaattttatgaaaaaatctataatcaagaattagcctcctga
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