Strigops habroptila (Kakapo): 115614893
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Entry
115614893 CDS
T08851
Symbol
LAMB2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04510
Focal adhesion
shab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115614893 (LAMB2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115614893 (LAMB2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Sec10_N
Laminin_II
CCDC144C
F5_F8_type_C
Tropomyosin
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
115614893
NCBI-ProteinID:
XP_030358231
LinkDB
All DBs
Position
11:complement(35881426..35892798)
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AA seq
1802 aa
AA seq
DB search
MRSPGALLLLPLLAGLGGTSAPDPPQVCALGSCYPATGDLLVGRAPRLSATSTCGLRRPQ
PYCIVSHLQEEKKCFICDSRRPYDARANTNSHRIENVVTTFAPRPKKAWWQSENGVEHVS
IQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRSWKVYRYFAYDCATSFPHVPRGPP
RRIDDVVCESRYSDIEPSTEGEVIYRVLDPSIPIRDPYSPDIQNLLRVTNLRVNLTKLHT
LGDNLLDTRREIREKYYYALYELVLRGNCFCYGHASECAPLSGAPATTDGMVHGRCVCKH
HTQGLNCERCEDFYHDLPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVC
DGCQHNTMGRRCHLCKPFYYKDPSKDLRDPAVCRACDCDPEGSLDGGMCDSADDPARGLI
AGQCRCKEHVAGPRCDRCKPGFFGLSAANPQGCQRCQCDPRGTVVEGSRCDAVSGECFCK
RLVTGRSCSQCLPEHWGLSHDIPGCRPCDCDVGGARNNLCAVETGQCQCRSHVVGRQCDR
VEPGFYRINLDHYTYESEDARLHQGSVVEREPPTDRPASWTGTGFARMVEGGWLEFHVSD
VPFSMEYDVIIRYEPQHPEPWQEVRVKVLRPSPVSASSPCGNTIPADDQLSTSLPSGARY
VVLPQPICLERGVSYTIRVELGCASAQQDPSASVLIDSLVLLPRYSSLEMFIAGDPISMK
RRETFERYRCAQPFHAAGPSPVAEPCSRLLHSLSAILHDGALRESGPAPRCVLRPLWQRS
PRSLPAACLCDPQGSTSAECQPQGGQCQCKPNVMGRRCHRCSPGTFGFGPGGCRACQCSS
EGSVSPVCDTTTGQCSCREGAHGSRCDRCQPGHWGFPSCRPCQCNGHAEECDPRTGSCLR
CRDHTDGERCQRCAAGHFGNPALGSGQHCRPCPCPDGPGSSRHFAASCYQDSRSRQVICH
CSPGYTGPRCDECAPGYYGDPQQPGGRCLPCQCHDNIDMTDPEACDRHTGRCLRCLYNTA
GPHCAECQPGFYGDAARHSCRRCSCNPLGTDPSTCSPQQCHCDVRSGQCHCLPNVEGQSC
DRCSPNFWNLGSGQGCQPCACHPQHALTPTCNQFTGQCSCRPGFGGRTCADCQEQHWGDP
RQQCRACDCDPRGVASAQCHRGSGHCDCRPGISGVRCDQCARGFSGAFPACQPCHPCFGD
WDRVVQDLAARTRALAQRVSLLQHTGAASAFQGTFRRLEENLVTVRDVVAAHNATAATAA
HLTHATEGLRRHIEEATERLTRLEGELTAAQDANFNASHVLSVVDRGARALNHSLQDLEQ
RLQALKTSNFLGAYDSIREAYGESRDAEHRADASTRAVPSPISTSVATRHHAEQLMASHR
DDFNRQNAASRRALMDLAARAQALSLQPLNEKVCGAAGDVPCAESPCGGAGCRDEDGGRR
CGGLSCGGAVSTADSALDRARHAQEELRQAASDMAQLSHKVAEAKGKADEARLRAQAALD
KANQTRARVESSNKELRELISHVKAFLSQEGADPESIEVVASRVLELSLPAAPAQIHRLA
EEIKARVRSLASVDAILEQTAGDVRRAGQLLQEAQRARSRAEGVRGTAEAVRQALEEAQR
AQGMAEEALHHATGDIQHSERALGTMQAQTASAEQRLAGATAQIGALDGQMDSLKVKRAN
NSLAATRAQEAAGTARDRAGEAKQVLEGPLRDRYRAAQELVQHRAEGARQAGGRAQRLRD
EAAGLLQDAQGKLQRLRALEEAYERNERVLDAKAAQLGGLEARLRDVLAAINQQVQIYNT
CQ
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgcggagccccggtgccctcctgctgctgccgctgctggccgggcttgggggaacctcg
gcccccgaccccccccaggtctgcgcccttgggagctgctacccggccaccggggacctg
ctggtggggcgagccccccgcctgagcgccacctccacctgcgggctgcgccggccacag
ccctactgcatcgtcagccacctccaggaggagaagaagtgcttcatctgcgactcgcgg
cggccctacgatgcccgtgccaacaccaacagccaccgcatcgagaacgtggtcaccacc
ttcgccccccggcccaagaaagcctggtggcagtcggagaacggcgtggagcacgtcagc
atccagttggacctggaggccgagttccacttcacacacctcatcatgaccttcaagacg
ttccggcccgcggccatgctggtggagcgctcggctgacttcgggcgcagctggaaggtc
tatcggtacttcgcctatgattgtgccacctccttcccccacgtcccccgaggacccccg
cgccgcatcgacgacgtggtctgcgagtcccgctactccgacatcgagccctccaccgag
ggggaggtgatctaccgggtgctggacccctccatccccatccgggacccctacagcccc
gacatccagaacctgctgcgcgtcaccaacctgcgtgtgaacctcaccaagctgcacacg
ctgggggacaacctgctggatacacggcgcgagatccgggagaagtattactacgcgctc
tatgagctggtgctgcgcgggaactgcttctgctatggccatgcctccgagtgtgcccca
ctcagcggggcccctgccaccaccgatggcatggtccatggacgctgcgtctgcaagcac
cacacgcaggggctgaactgtgagcgctgcgaggacttctaccacgacctgccctggcgc
ccggctgagggctccagcaccaatgcctgccgccgctgtgactgcaacgagcactcgcgg
cgctgccacttcgacatggccgtcttcctggccaccggcaacaccagcggggccgtgtgt
gacggctgccagcacaacaccatgggccgccgctgccacctctgcaagcccttctactac
aaggatcccagcaaggacctgcgggaccccgccgtgtgccgagcctgtgactgtgacccc
gagggctctctggacggcgggatgtgtgacagcgctgacgacccagcccgggggctgatc
gcggggcagtgccgctgcaaggagcacgtggctggtccccgctgcgaccgctgcaaaccc
ggcttcttcggcctcagcgctgccaacccgcagggctgccagcgttgccagtgtgacccc
cgtggcacggtggtcgagggcagccggtgcgatgctgtgagcggtgagtgcttctgcaag
aggctggtgaccgggcgcagctgcagccagtgcctgcccgagcactgggggctgagccat
gacatcccgggctgccggccctgtgactgcgatgtggggggtgcccgcaacaacctgtgt
gccgtggagacggggcagtgccagtgccgcagccacgtggtggggcgacagtgtgaccgg
gtggagcctggtttctaccgcatcaacctggaccattacacctacgagtctgaggatgct
cggctgcatcagggctcagtggtggagcgtgagccccccacggaccgcccggcttcctgg
accgggacaggctttgcgcgcatggtggagggcggctggctggagttccatgtgagtgat
gtgcctttctccatggagtacgacgtgatcatccgctacgagccccagcacccggagccc
tggcaggaggtgagggtgaaggtgctgcgccccagccctgtctccgccagcagtccttgc
gggaacaccatcccagccgatgatcagctctccaccagcctcccctctggtgccaggtac
gtggtgctgccacagcccatctgcctggagcggggggtctcctacaccatccgagtggag
ctgggctgtgcctccgctcagcaggatcccagcgccagcgtgctcatcgattcgctggtg
ctcctgccccgttactcctcactggagatgttcatcgcgggcgaccccatctccatgaag
cgccgcgagaccttcgagcggtaccgctgtgcccagcccttccatgccgcggggccctcg
cccgtggccgagccctgctccaggctcctgcacagcctgtctgccatcctgcacgacggg
gcgctgcgtgagtctggccccgcaccccgttgtgtcctgcgccctttgtggcagcgctca
ccccgctctctgcccgcagcctgcctctgcgacccccagggctcgaccagcgccgagtgc
cagccccagggcgggcagtgccagtgcaaacccaatgtcatggggcggcgctgccaccgc
tgctccccaggaaccttcggctttgggcctggcgggtgccgagcatgccagtgcagcagc
gaggggtcggtgagccccgtctgtgacaccaccacagggcagtgctcctgccgggagggt
gcccatggctcacgctgtgaccgctgccagcccggccactggggcttcccatcctgccgg
ccctgccagtgcaacgggcacgccgaggagtgcgacccgcgcacgggcagctgcctgcgc
tgccgcgaccacaccgacggcgagaggtgccagagatgtgcagccgggcactttgggaac
ccggcgctgggctctgggcagcactgccggccgtgcccgtgtcccgatggacctggcagc
tcccggcacttcgccgcatcctgctaccaggacagccggtcccggcaggtcatctgccac
tgcagccctgggtacacaggtccccgctgtgatgagtgcgctccggggtactacggggac
ccgcagcagccgggcgggcgctgcctgccctgccagtgccacgacaacatcgacatgacg
gacccagaggcgtgcgaccggcacacggggcgctgcctgcgctgcctgtacaacacggcg
gggccgcactgcgccgagtgccagcccggcttctatggggatgccgcgcggcacagctgc
cggcgttgctcctgcaacccgctgggcaccgaccccagcacctgcagtccccagcagtgc
cattgcgacgtgcgcagcgggcagtgccactgcctgcccaacgtggaggggcagagctgc
gaccgctgcagccccaacttctggaacctgggcagcgggcaaggctgccagccctgcgcc
tgccacccccagcacgccctgacccccacctgcaaccagttcacagggcagtgctcgtgc
cggccgggcttcgggggccggacctgtgccgactgccaggagcaacactggggtgaccca
cggcagcagtgccgagcttgcgactgtgacccccgcggcgtcgccagtgcccagtgccac
cgtggcagcggccactgcgactgccggcccggcatctccggcgtgcgctgcgaccagtgc
gcacggggcttctccggcgccttccccgcctgccagccctgccacccctgcttcggggac
tgggaccgcgtggtgcaggacctggctgcgcgcacccgggcgctggcgcagcgcgtcagc
ctcctgcagcacaccggggctgccagcgccttccagggcactttccggcggctggaggag
aacctggtcaccgtgcgagacgtggtggctgcccataacgccactgccgccactgctgcc
cacctcacgcatgccacggaggggctgcggcggcacatcgaggaggcgacggagaggctg
acacggctggagggggagctgacggctgctcaggatgccaacttcaacgccagccatgtg
ctgagtgtggtggaccggggtgcccgcgccctcaaccacagcctgcaggacctggagcag
cggctgcaggccctcaagacctccaatttccttggtgcctacgacagcatccgcgaggcc
tatggggagtcacgggatgcggagcaccgggctgatgcctccacccgcgccgtacccagc
cccatcagcacctcggtggccacccggcaccacgccgagcagctcatggccagccatagg
gatgacttcaatcgccagaacgcagccagccggcgggcgctgatggacctggcagcaaga
gcacaggcactgagcctgcagccgctcaatgagaaggtctgcggtgctgcgggtgacgtg
ccctgtgccgagagcccctgcggaggagccgggtgccgggatgaggatgggggacggcgc
tgcggggggctgagctgcggcggggccgtgtccacggcggacagtgcgctggaccgggca
cgccacgcacaggaggagctgcggcaggcggccagcgacatggcccagctatcccataag
gtggctgaggccaaggggaaggcagatgaggctcggctgcgggcacaggcggcgctggac
aaggcaaaccagaccagggcccgtgtggagagctccaacaaggagctgcgggagctcatc
agccacgtcaaggccttcctgagccaggagggcgccgaccccgagagcatcgaggtggtg
gccagccgcgtgctggagctgtcgctgccggccgcgccggcgcagatccaccgcctggcc
gaggagatcaaggcgcgggtgcgcagcctggccagcgtggatgccatcctggagcagacg
gccggcgacgtgcgccgggccgggcagctgctgcaggaggcacagcgagcccggtcgcgg
gctgaaggcgtgcggggcacggccgaggcggtgcggcaggcgctggaggaggcgcagcgg
gcacagggcatggcggaggaggcgctgcaccacgccaccggcgacatccagcacagcgag
agagcgctcggcacgatgcaagcccagacagcgagtgcagagcagcggctggcgggcgcc
acggctcagatcggggcgctggacggacagatggactccctgaaggtgaaacgcgccaac
aacagcctggcggccacacgagcccaggaggcggccggcaccgcgcgggaccgcgccggc
gaggccaagcaggtgctggaggggccgctgcgggaccggtaccgcgcggcgcaggagctg
gtgcagcaccgcgcggagggcgcgcggcaggcgggcgggcgggcgcagcgcctgcgggac
gaggcggcggggctgctgcaggatgcgcagggcaaactgcagcggctgcgagcgctggag
gaggcgtacgagcgcaacgagcgggtgctggacgccaaggcggcgcagctgggcgggctg
gaggccaggctgagggacgtgctggccgccatcaaccagcaggtccagatctacaacacg
tgccagtga
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