Strigops habroptila (Kakapo): 115616955
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Entry
115616955 CDS
T08851
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04020
Calcium signaling pathway
shab04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115616955 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115616955 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115616955 (GRIN1)
Ion channels [BR:
shab04040
]
Ligand-gated channels
Glutamate (ionotropic)
115616955 (GRIN1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
115616955
NCBI-ProteinID:
XP_030362702
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Position
15:11094666..11134592
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AA seq
988 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEEASSAPTAERGRSPRLAAPAPWRLVL
PACAHQQYHPTDITGQLNLSDPSVSTVV
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctgctcttctcgtcctccttcgcccgcgcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctaagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacatggaagctccagctc
aacgccacctcggtcacgcacaagcccaacgccatccagatggccctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctctcctttttgcgcacg
gtcccaccgtactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aaccacgtcattctgatagtcagcgacgaccacgagggtcgtgctgcacaaaagaagctg
gagaccctcttggaggagagagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgacccg
ggaaccaaaaatgtgacatcgctgctgctggaggcaaaggagctggaggctcgagtcatc
atcctctctgccagtgaggatgatgcagccacggtgtacagatcagcagccatgctcaat
atgacgggctccggctacgtgtggctggtgggggaacgggagatatcgggcaatgccctg
cgttacgcccctgacggagtgatcggtttgcagctcatcaacgggaagaatgagtcagcc
cacatcagtgatgctgtcgcagtggtggcccaggccgtgcatgacttgtttgagaaggaa
aacatcacagatccaccacggggctgcgtgggcaacaccaacatctggaagacaggaccc
cttttcaagagggtgttgatgtcctccaagtactcagagggtgtcaccggccgggtggag
ttcaatgaggatggggacagaaagtttgccaactacagcatcatgaacctgcagaatcgg
aaactggtccaagttgggatttacaatggcagccatgtcctgaccaacgacaggaagatt
atctggccagggggagaaacagagaaacctcaaggctatcagatgtcaaccaaattgaag
atcgtgacaatccaccaggagccctttgtatacgtgaagcccacacaagcagatgggacg
tgcagggaggaattcaccatcaatggagatcctgtgaaaaaggtcttttgcactgggccc
aatgagaccatcccaggccgccccaccgtggcactgtgctgctacgggttctgcattgac
ctgctcatccggctggcaggggtgatgaacttcacctatgaggttcacctggtggctgat
ggtaaatttggtacccaagagcgggttaacaacagcaacaagaaggagtggaacgggatg
atgggtgagctgctgagcggccaagcagacatgattgtggctcccctcaccatcaacaac
gagcgggcacagtacattgagttctccaagcccttcaagtaccagggtctcaccatcctt
gtgaagaaggaaatcccccgcagcaccttggactcattcatgcagcctttccagagcacg
ctgtggctgctggtggggctgtctgtgcacgtggtggcagtgatgttgtacctcttagac
cgattcagcccatttggccggttcaaagtgaacagtgaggaggaggaggaagatgccctc
accctgtcctcagccatgtggttctcctggggagtcctgctgaactctggcatcggagaa
ggtgctcctcggagtttctctgcccgtattcttggcatggtgtgggctggctttgctatg
atcattgtggcttcatacactgccaacctggcagccttcctggtgttagaccggcctgag
gagagaattacgggcatcaatgacccccggctgcgcaacccctctgataagttcatctac
gccacggtgaagcagagctcggtggacatctacttccgacggcaggtggagctgagcacc
atgtaccggcacatggagaagcacaactacgagagcgctgctgaggccatccaggcagtg
agggacaacaagctccacgccttcatctgggactcggcagtgctggagttcgaagcctcc
cagaagtgtgacctggtgacgacgggggagcttttcttccgctctggctttgggatcggg
atgcgcaaggacagcccatggaagcagaacgtctccctggccatcctcaagtcccacgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgactcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggaaaggtcacactcattggcacgaaagcaattggggaggaagcgtcctcagcgccc
acggccgagcgcggccggtccccgcggctcgctgcccccgcgccatggcggctggtgctc
ccagcctgcgcccaccagcaatatcaccccaccgacatcacaggccagctcaacctctcc
gacccctcagtcagcactgtggtgtga
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