Strigops habroptila (Kakapo): 115618021
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Entry
115618021 CDS
T08851
Symbol
GRIN3B
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04020
Calcium signaling pathway
shab04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115618021 (GRIN3B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115618021 (GRIN3B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115618021 (GRIN3B)
Ion channels [BR:
shab04040
]
Ligand-gated channels
Glutamate (ionotropic)
115618021 (GRIN3B)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
115618021
NCBI-ProteinID:
XP_030364981
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All DBs
Position
20:1624135..1630615
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AA seq
1022 aa
AA seq
DB search
MAGLRALWLLAALGAAGGHPQPCRVPAPPGPAVRLGALLPPGSPRRARLRAALARAAGAG
ASPGAGPGGTPLPSNLSLEVVAGGPAARDPGSLARWLCGALAGRGVAAVLALPRSRRELL
LLDFLAAALEIPFVSLLDTRGLLPVRAQSPFHFRVDRQSSLETLVDVLVSILQANDWQET
NLVLCHPWDVSGFLGLWARRSQLFLRTVLDLGYLDEPRATRYLQQHREHFRTLSSPVLVL
GCDLQRARLIFRTAEESGLLLHELHWVLGSPLSAGELQTEGLPLGLLAYGELNPPPLELF
IQDVVELVSRAIGSASRTRPGPAVLHTAVNCSDGRPAGGESPGLVLSRFLSNTSFHGRTG
PVRVESARLVRLEQRFHVWRLQRDPRGAPAWGTVGSWRRGRLELEEGARQSQRHGPGEAA
AGTHRRLRVVTLVEHPFVFTREVDEDESCPVGQLCLDPGTNDSAVLDALFEELGAGNGSV
PRVYKKCCYGYCIDLLEKLAEDMSFAFELYIVGDGKYGAWKNGRWTGLVGDLLSGMAHMA
VTSFSINSARSKVIDFTSPFFSTSLSILVRTKDTASPIGAFMWPLHWTMWVGVFVALHMT
ALFLTLYEWKSPYGMTPLGRNRMKIFSYSSALNLCYAILFGRTVSSKTPKCCTGRFLMNL
WAIFCLLVLSSYTANLAAVMVGEKTFEELSGIHDPKLHHPSQGFCFGTVWESSAEEYIKK
SFPEMHEHMRRHNVPNTPAGITMLKTEPPKLNAFIMDKSLLDYEVSIDSDCKLLTVGKPF
AIEGYGIGLPQNSPLTSNISKLISWYKSSGFIDLLHDKWYKMVPCGKRVLAVTETLQMGI
YHFSGLFVLLCIGLSTSLLTSLGEHVFYRLVLPRIKRKKKFNYWLHTSQKIHRALNMGTE
EQQSQKLSLEQRCALQPRPWSTRRVRFQLDSKAPPEGEEPPGNGPLEQELRELERSIWEL
RDRLRAALARRSELVAALGTAKGSRVLPAGTATEEPPERHPPARPSSAPLQGSREEEEEE
GE
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgcgggcgctgtggctgctggcggcgctgggcgcggcgggggggcacccg
cagccctgccgcgtcccggccccccccggccccgccgtgcgcctcggggcgctgctgccg
cccggctccccccgtcgcgcccggctccgcgccgcgctggccagagccgccggtgccggt
gccagccccggggcgggtcccggggggacgccgctgccctcgaacctcagcctggaggtg
gtggcgggcggcccggccgcgcgggacccgggctcgctggcgcggtggctctgcggggcg
ctggcggggcgcggcgttgctgccgtcctggcgctgccccgctcccggcgggagctgctc
ctgctcgacttcctcgccgccgccctggagatccccttcgtcagcctcctggacacccgc
gggctcctgcccgtccgagcgcagagccccttccacttccgtgtggaccggcagagctcg
ctggagacgctggtggacgtgctggtgagcatcctgcaggccaacgactggcaggagacc
aacctggtgctctgccacccctgggacgtctccggcttcctcggcctctgggcccgtcgc
tcccagctcttcctccgcaccgtcctggacctcgggtacctggacgagcccagggccacc
cgctacctccagcagcaccgggagcacttcaggaccctctccagccccgtgctggtgctc
ggctgcgacctgcagcgcgcccggctcatcttccgcacggccgaggagtcggggctgctg
ctgcacgagcttcactgggtgctggggtccccgctcagcgccggagagctgcagaccgag
gggctgcccctggggctgctggcttacggggagctcaacccgccgccgctggagctcttc
atccaggacgtggtggagctggtgtcccgcgccatcggcagcgcatcccgcacccggccc
ggccccgccgtgctgcacaccgcagtgaactgcagcgacgggcgcccggcgggtggcgag
tcacccggcctcgtcctctcccggttcctgtccaacacgtccttccacggccgcacgggg
ccggtgcgggtggagagcgcgaggctggtgcggctggagcagcggttccacgtgtggcgc
ctgcagcgggacccgcggggggccccggcctgggggacggtgggctcgtggcggcgcggg
aggctggagctggaggagggcgcccggcagagccagcgccacggccccggcgaggcggcc
gcgggcacccaccggcggctgcgcgtggtgacgctggtggagcatcccttcgtcttcacc
agggaggtggatgaggacgagagctgccccgttgggcagctctgcctggaccctggcacc
aacgactcggccgtgctggacgccctctttgaggagctgggtgctggcaacgggtcggtg
ccgcgggtgtacaagaagtgctgctacgggtactgcattgacctgctggagaagctggct
gaggacatgagctttgcctttgagctctacattgtgggtgatgggaaatacggggcctgg
aagaacgggcgctggacggggctggtgggggacctgctcagcggcatggcccacatggcc
gtcacctccttcagcatcaactcggcacggagcaaagtcatcgacttcaccagccccttc
ttctccaccagcctgagcatcctggtgaggaccaaggacacggcgtcgcccatcggagcc
ttcatgtggcccttgcactggaccatgtgggtgggcgtctttgtggccctgcacatgacg
gccctcttcctcaccctgtacgagtggaagagcccctacggcatgacccccctcggccgc
aaccgcatgaagatcttctcctactcctcagccctcaacctctgctacgccatcctcttt
gggcgcaccgtgtccagcaagacgcccaagtgctgcaccggccgcttcctcatgaacctc
tgggccatcttctgcctcctggtgctctccagctacacggccaacctggcggctgtcatg
gtgggggaaaagaccttcgaggagctctcaggcatccacgacccaaagctgcatcacccc
tcgcagggcttctgcttcggcaccgtgtgggagagcagcgccgaggagtacatcaagaag
agcttccccgagatgcatgagcacatgcggcgccacaacgtccccaacacccctgctggc
atcaccatgctcaagacggagccccccaagctcaacgccttcatcatggacaagtcgctg
ctggactatgaggtctccattgactctgactgcaaactgctcactgtgggcaaacccttc
gccattgaaggctacggcatcggcctcccgcagaactcgccgctcacctccaacatctcc
aagctcatcagctggtacaagtcctccgggttcatcgacctcctgcacgacaagtggtac
aagatggtgccgtgcgggaagcgcgtcctcgctgtcaccgagaccctgcagatgggcatc
taccacttctcggggctctttgtgctgctctgcattgggctcagcacctcgctgctcacc
tctctgggcgaacacgtcttctaccgcctcgtcctgccccgcatcaagcgcaagaagaag
ttcaactactggctgcacacgagccagaaaatccaccgggctctgaacatgggcacagag
gagcagcagagccaaaagctgagcttggagcagaggtgcgccctgcagccgaggccctgg
agcacacgacgggtgcgcttccagctggacagcaaagccccccccgagggcgaggagccc
cccgggaacgggcccctggagcaggagctgcgggagctggagcggagcatctgggagctg
cgggaccggctgcgcgcggccctggccaggaggagcgagctggtggccgcgctgggcacg
gccaagggcagccgggtgctgcctgcagggacagccaccgaggagcccccggagaggcac
cccccggcccggcccagctcagccccactgcaaggcagcagagaggaggaggaggaggaa
ggtgaatag
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