Sphingomonas hankookensis: PPZ50_10630
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Entry
PPZ50_10630 CDS
T08811
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
shan
Sphingomonas hankookensis
Pathway
shan00190
Oxidative phosphorylation
shan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
PPZ50_10630
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PPZ50_10630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shan03019
]
PPZ50_10630
Enzymes [BR:
shan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
PPZ50_10630
Messenger RNA biogenesis [BR:
shan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PPZ50_10630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
WCP70835
LinkDB
All DBs
Position
2242336..2244510
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AA seq
724 aa
AA seq
DB search
MNDPVPSARTTVAAAPEARYFNRELSWLAFNRRVLDEACNPDHPLLERLRFLSISATNID
EFFMVRVAGLKGQQNQGVGHESVDGLTPSQQLAAITVDAAGLVDSQQRIWRDIAAALAEA
NIFVLGADEIRGDTEVWLERHFRDQIFPVLTPQALDPAHPFPFIPNLGSAMLFDLIRRSD
DVEVREVVLLPPAMPRFVRLPGKAARYVAIETILRHFSDLFFPGYTVRASAAFRVIRDSD
IELEEEAEDLVLYFRTAIKRRRRGRIIRLEIESGISDELVQLLRDEMGGSDALITETGGF
LGIGDLSMLVAEDRPDLKFPPFSPRFPERIREYGGDCFAAIRAKDIVVHHPYETFDVVLA
FLKQAAADPDVVAIKQTLYRAGKQSAVVAALVAAAEAGKSVTAVVELKARFDEEQNLNLA
SVLERAGVQVVYGFIEWKTHAKISMVVRREEQGYRTYCHFGTGNYHPVTARIYTDLSFFT
ADPVIGRDAAQVFNYITGYVEPQALQQLAISPRDLRNRLEALIEGEIQTARSGGEGSIWL
KMNSLVDPALIDKLYEASAAGVQIDLIVRGICCLRPGVPGMSDNIRVKSVVGRFLEHSRI
YCFGNGQALPNDDALVYVSSADWMPRNFDRRVEYLLPINNPTVHDQVLDQVMVANLLDTE
QTWELGPDGSYRRVAKGERPFNLHRYFMTNPSLSGRGAAIESGSATVPQKLSLRAWRAAR
DGAV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatccggtcccctccgcccgcaccacggtcgccgccgcgccggaagcgcgctac
ttcaaccgcgaactgtcgtggctggcgttcaaccgccgcgtgctggacgaagcgtgcaac
cccgaccatccgctgctcgaaaggctccgcttcctgtcgatttcggccaccaacatcgac
gaattcttcatggtccgcgtggccggcctgaaggggcagcagaaccagggcgtcggccat
gaatcggtcgatggcctcaccccttcgcaacagctggccgcgatcaccgtcgacgccgcc
gggctggtcgacagccagcagcgcatctggcgcgacatcgccgccgcgctggccgaagcc
aacatcttcgtgctcggcgccgacgagatccgcggcgataccgaagtctggctggaacgc
catttccgcgaccagatctttccggtcctgaccccgcaggcgctggatccggcgcatccg
ttccccttcatcccgaacctcggctcggcgatgctgttcgacctcatccgccgctcggac
gatgtcgaggtgcgcgaagtcgtcctgctcccgcccgccatgccgcgcttcgtccgcctg
ccgggcaaggccgcgcgctatgtcgcgatcgaaacgatcctgcgccatttctccgacctg
ttctttccgggctacaccgtgcgcgcgtcggccgccttccgcgtgatccgcgacagcgat
atcgagctggaggaagaggccgaagacctcgtcctctatttccgcaccgccatcaaacgc
cgccgtcgcggacggatcatccgccttgaaatcgaatcgggcatctccgacgaactggtc
cagctgctgcgcgacgaaatgggcggcagcgatgcgctgatcaccgaaaccggcgggttt
ctcggcatcggcgacctgtcgatgctggtcgcggaggatcgccccgacctgaaattcccg
cccttctccccgcgcttccccgaacgcatccgcgaatatggcggcgactgtttcgcggcg
atccgggcgaaggacatcgtcgtccaccacccgtacgaaaccttcgacgtggtgctggcc
ttcctcaaacaggccgccgccgaccccgatgtcgtggcgatcaagcagacgctctaccgc
gccggcaagcagtccgccgtcgtcgccgcgctggtcgccgctgccgaagcgggcaagtcg
gtcaccgccgtcgtcgaattgaaggcccgcttcgacgaggagcagaatctcaacctcgcc
tcggtcctcgaacgcgccggggtgcaggtcgtctacggctttatcgagtggaagacccat
gcgaagatctcgatggtcgtccgccgcgaggagcagggctatcgcacctattgccacttc
ggcaccggcaattatcatcccgtaaccgcgcgtatctataccgacctcagcttcttcacc
gccgatccggtgatcggacgcgacgccgcgcaggtgttcaactacatcaccggctatgtc
gaaccgcaggcgttgcaacagctcgccatttcgccgcgcgatctgcgcaaccggctggag
gcgttgatcgagggcgagatccagaccgcgcggtcgggcggcgaaggatcgatctggttg
aagatgaactcgctggtcgacccggcgctgatcgacaagctgtatgaggcgtcggcggcg
ggcgtccagatcgacctgatcgtgcgcggcatctgctgcctgcggccgggcgtgccgggc
atgtccgacaacattcgcgtcaaatcggtcgtcggccgcttcctcgaacacagccgcatc
tattgcttcggcaacggacaggcgctgcccaatgacgatgctttggtctatgtgtcctcg
gccgactggatgccgcgcaatttcgaccgccgcgtcgaatatctgctgccgatcaacaac
ccgaccgtccacgaccaggtgctcgatcaggtgatggtcgccaacctgctcgacaccgaa
cagacatgggaactcggaccggacggcagctatcgccgcgtcgccaagggtgagcgtccg
ttcaacctccaccgctatttcatgaccaacccgtcgctatcgggacgcggtgccgcgatc
gaaagcgggtcggcgacggtgccgcagaaattgtcgctccgcgcgtggcgggccgcacgg
gacggcgcggtttga
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