Salmonella enterica subsp. enterica serovar Heidelberg B182: SU5_0883
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Entry
SU5_0883 CDS
T02011
Name
(GenBank) Lysine decarboxylase 2, constitutive
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
shb
Salmonella enterica subsp. enterica serovar Heidelberg B182
Pathway
shb00310
Lysine degradation
shb01100
Metabolic pathways
shb01110
Biosynthesis of secondary metabolites
shb01120
Microbial metabolism in diverse environments
Module
shb_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
shb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SU5_0883
Enzymes [BR:
shb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SU5_0883
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AFH44252
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All DBs
Position
1018427..1020568
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AA seq
713 aa
AA seq
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MNIIAIMGPHGVYYKDEPIKELERALQSLGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSEINQLNEYLPLYAFINTNSTLDVSVHDMRMALWFFEYALGLAEDIATRIHQY
TNEYLDNITPPFTKALFTYAKEGKYTFCTPGHMAGTAYQKSPPGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPRREFTRASIESKIEETPQAQWPVH
AVITNSTYDGLLYNTNWIKQMLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGDRVPGKVIF
ETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASIETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDSWFFDIWQPEEVDEAECWPVTPGETWHGFADAD
DDHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQH
DLPGLMLRAFEVLPEMIMTPHQAWQRQIKGEVETVALDQLPGRVSANMILPYPPGVPLLM
PGERITQQSRAVLDFLLMLCSIGQHYPGFETDIHGAKRNEDGVYQVRVLKHAC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatcgccattatggggccgcacggggtttattataaagatgaacccatcaag
gagcttgagcgtgcattacaatccctgggatttcaaattatctggccgcaaaatagcgtt
gacttgttgaagtttattgaacataacccgcgcatctgcggcgttatttttgattgggat
gaatacagtctcgacctttgtagcgaaatcaaccagctaaatgaataccttcctctctac
gcctttatcaataccaactccacgctggacgttagcgttcacgatatgcgcatggcgctg
tggttttttgagtatgcgttggggctggctgaagatatcgcgacgcgcattcatcaatat
acaaacgaatatctcgataatattacgccaccgtttaccaaagcgctgtttacctacgcc
aaagaaggaaaatataccttttgtacgccgggtcatatggcgggaacggcgtatcagaaa
agtccgccaggctgtctgttttatgacttttttggcggcaataccttaaaagctgatgtg
tcgatttcggtgactgaactgggatcgctgctggatcacaccgggccgcatctggaagcg
gaagagtatatcgcccgtacttttggcgccgagcagagctatatggtgacgaacggtacg
tcgacctcgaataaaattgtcggtatgtatgccgcgcctgcgggaagtacgctactcatt
gatcgtaattgtcataaatcgctggcgcatttgctgatgatgagcgatgtggtgcctctc
tggttgaagccgacgcgcaatgcgctcggtattctcggcggtattccccgaagggaattt
acccgtgcaagcatcgaaagcaagatagaggagacccctcaggcgcaatggccggtgcat
gcggttatcaccaattcgacttacgatggtctgctgtataacactaactggatcaagcag
atgctggacgttccctcgatccattttgattccgcctgggtaccctatacccatttccat
ccgatctaccaggggaaaagcgggatgagcggcgatcgggtgcccggaaaagtgattttt
gaaacgcaatccacccataaaatgctggcggctttttcgcaggcgtcgcttattcatatc
aaaggggaatatgacgaagaaacgtttaacgaagcgtttatgatgcacacttccacatcg
ccgagctatcccattgtcgcctctatcgagaccgcggcggcgatgctgcgcggcaatcca
gggaaaagattgattaatcgttcggtggaacgggcgctccattttcgtaaagaagtacag
cggttacgtgaagagtccgatagctggttctttgatatctggcagccggaagaggttgat
gaggccgaatgctggccggtcacgccgggagaaacctggcatggcttcgccgatgccgat
gacgatcatatgttcctcgatccggttaaggtgacaatcctgacgccggggatggatgaa
cagggcaacatgagcgaagaggggatacccgccgcgctggtggcgaagttcctcgatgag
cgaggcgtagtggtggaaaaaaccgggccgtataatctgctgtttttgttcagcataggg
attgataagacccgtgcgatggggctgctgcgcggactgacggaatttaaacgcgcctac
gatcttaacctgcgcgtcaaaaatatgttgccggatctgtatgcggaagatccggatttt
tatcgcaatatgcgcattcaggatctggcgcaggggatccataaactgatccgccagcac
gatcttccggggctgatgctgcgggcgttcgaggttttaccggagatgattatgaccccg
caccaggcctggcagcgtcagatcaaaggcgaggtggaaaccgtggcgctcgatcaactg
ccagggcgcgtttccgcgaatatgatcctgccttatccgccaggcgttccgctgttgatg
cccggcgagaggatcacgcaacagagtcgggccgtgctcgattttctgctgatgctctgc
tcgattggccagcattatcccggttttgaaacggatattcacggcgcgaaacggaatgaa
gacggggtgtaccaggtacgagtcttaaaacacgcctgttag
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