Shewanella sp. MR-4: Shewmr4_1408
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Entry
Shewmr4_1408 CDS
T00388
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
she
Shewanella sp. MR-4
Pathway
she00071
Fatty acid degradation
she00280
Valine, leucine and isoleucine degradation
she00310
Lysine degradation
she00362
Benzoate degradation
she00380
Tryptophan metabolism
she00410
beta-Alanine metabolism
she00640
Propanoate metabolism
she00650
Butanoate metabolism
she00907
Pinene, camphor and geraniol degradation
she00930
Caprolactam degradation
she01100
Metabolic pathways
she01110
Biosynthesis of secondary metabolites
she01120
Microbial metabolism in diverse environments
she01200
Carbon metabolism
she01212
Fatty acid metabolism
Module
she_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Shewmr4_1408
00650 Butanoate metabolism
Shewmr4_1408
09103 Lipid metabolism
00071 Fatty acid degradation
Shewmr4_1408
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Shewmr4_1408
00310 Lysine degradation
Shewmr4_1408
00380 Tryptophan metabolism
Shewmr4_1408
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Shewmr4_1408
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Shewmr4_1408
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Shewmr4_1408
00930 Caprolactam degradation
Shewmr4_1408
Enzymes [BR:
she01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Shewmr4_1408
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Shewmr4_1408
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Shewmr4_1408
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
LEM
Motif
Other DBs
NCBI-ProteinID:
ABI38486
UniProt:
Q0HKD1
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All DBs
Position
1639736..1641865
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AA seq
709 aa
AA seq
DB search
MEKTFNLTRREDGIAILTMDVPGETMNTLKAEFGPEISEILSEIKRDSSIRGLVLISGKK
DSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALA
CHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM
GLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLVNQLLEGTGFGRNIIFDQAAKQVAKK
TQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKESEALRSIFFATTEMKKET
GAEGATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKDINEKGLSNALSYAYKLLDK
GVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFEDLALKHQMVKDIERECGEHT
IFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHLDKALVKFGFPVGPITLLDE
VGIDVGAKIAPILEKELGERFKAPAAFDKLLSDDRKGRKNGKGFYQYAAGNKAPSKKKAV
DESVYGVLGIKPGIDKEMSAVAERCVVQMLNEAVRCLDDGIIASPRDGDIGAIFGIGFPP
FLGGPFHYIDTLGADNLVKILERYQAQYGDRFEPCPRLKEMAAEKTRFF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacatttaatttaacccgccgtgaagacggtatcgccattctaacgatggac
gtacccggcgaaaccatgaataccctcaaggcagaatttggccctgagatcagtgagatt
ctgtctgagattaaacgcgatagcagtatccgtggcctagtgctgatttcgggtaaaaaa
gactccttcgtagctggggcggatatctctatgctcgacgcttgccaaacggcgggcgat
gctaaagccttatcccaacaagggcatgtggtgtttaacgagttagaagccttgaatatc
cctgtggttgccgcgatacatggcgcttgtttagggggcggtttagagcttgcgcttgca
tgccatcaacgtgtgtgtagtgatgatggcaagaccatgctgggtgtacccgaagtgcaa
ctcggtttattacccggtggcggcggtactcagcgtttgcctcgtttagtggggatcacc
actgccttggatatgatgttgactggtaaacaaatccgtccgaaacaagcgttaaagatg
ggcttagttaacgatgtggtgccacagacgattttactgcaaaccgcggtggaaatggcg
ctcgcgggtaagcgcacggcgaaaccagttaaaaaatcgctggtcaatcaattactcgaa
ggtacaggattcggtcgtaacattattttcgatcaagccgccaagcaagtcgctaagaaa
acccaaggcaactatcctgcgccggcaaaaattattgattgcgtgcgccaaggtatggct
aagggaatgcaaaaagggcttgaggtggaagccagccattttgcagagctggtggtgtcg
aaagaatcagaggcgctgcgcagtattttctttgccaccacagagatgaagaaagaaact
ggcgccgaaggggcgacaccacgtaaagtcaaaaaagccgtgatcttaggtggcggtttg
atgggcggtggtattgcttcggtcacgacgactaaggctaaaattcctgcaagggtaaaa
gacattaacgaaaagggcttaagcaatgcgctttcttacgcctataagttattggataaa
ggcgttaaacgtcgtcatatgacgccagccgttcgcgacaatttaatggcactgatgaca
acgacgaccgaatataaaggcgttaaggacgctgatattgttgttgaagccgtatttgag
gatttagcgcttaaacatcagatggttaaagatattgagcgtgaatgcggtgagcacacg
atttttgcatctaacacctcatctttacccattggccaaattgcacaagcggccagccgt
cctgaaaatgtgattggcttacattatttctcaccagtagaaaaaatgccgttggtggaa
gtgattgcccatgcgaaaacgtctcctgagacgattgctaccacagtggcctttgcccgc
aaacagggtaaaacgccaatcgtggtacaagacggtgccggtttttatgttaatcgtatc
ctcgcactttacatgaacgaagctgcgcaattgctgctggaagggcagagtattgagcac
ttagacaaagccttagtgaagttcggtttccccgttggccctatcactctgctcgatgaa
gtgggtatcgatgtgggtgctaaaatcgctccaatccttgaaaaagaactgggtgagcgc
tttaaagcccctgcagccttcgataagttactgagcgatgatagaaaaggccgtaaaaat
ggcaaaggtttctatcaatatgctgctggcaataaagcgccgagcaagaagaaagccgtg
gatgaaagtgtatatggcgtattaggtatcaaaccgggtatcgataaagaaatgagcgcg
gtagcggaacgttgtgtcgtgcaaatgctcaatgaagctgtgcgctgcttagatgacggc
attattgcttcaccacgcgatggtgatattggcgctatcttcggtattggtttcccacca
ttcttgggtggcccattccactatatcgatactctaggggccgataacttagtcaagata
ctggaacgttaccaggctcaatacggcgaccgatttgagccatgtccacgtcttaaggag
atggcggcagaaaagacacgtttcttctaa
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