Shewanella sp. MR-4: Shewmr4_2726
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Entry
Shewmr4_2726 CDS
T00388
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
she
Shewanella sp. MR-4
Pathway
she00730
Thiamine metabolism
she01100
Metabolic pathways
she01240
Biosynthesis of cofactors
she04122
Sulfur relay system
Module
she_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Shewmr4_2726
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Shewmr4_2726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
she03016
]
Shewmr4_2726
Enzymes [BR:
she01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
Shewmr4_2726
Transfer RNA biogenesis [BR:
she03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Shewmr4_2726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
ABI39797
UniProt:
Q0HGM0
LinkDB
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Position
complement(3254212..3255666)
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKPVRMRFTKMLETNIRNVLKKVDEDAKVQRQWDRIWVKVPNDKPE
LAQAFGERLACIPGIAHVVQVDEYSFTSVDDIYQQVLPVYRDQIAGKTFCVRVKRTGSHD
FNSIEVERYVGGGLNQFTDAIGVRLKNPEVTVNLEIEGDKLYMVTKRIEGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVK
FVSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAERMGIQAIVTGESLGQVSSQTL
TNLNVIDRCTDMLILRPLIAMDKQDIINECRRIGTEDFAKSMPEYCGVISQKPTVKAVLA
KVEAEETKFSEDLIDRIVEQAVVIDIREIAEQMNTRITETETVVAIDTNEVVIDIRAPEE
EENKPLEIEGVEIKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYHNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagctgtacccagaaatcatgatgaagagcaagcccgtgcgcatg
cgcttcaccaaaatgcttgaaaccaacatccgtaacgtgctcaaaaaagttgatgaagat
gccaaagtgcaacgtcaatgggaccgtatttgggtaaaggtgccaaatgataaacctgaa
ttagctcaggcctttggtgagcgtttagcctgtattcctgggatcgcccatgtggtgcaa
gtggatgaatacagctttacctcagtcgacgatatctaccagcaagtcttacccgtttac
cgtgaccaaattgccggtaaaaccttctgtgtgcgcgtcaaacgtactggctcccacgat
tttaactctatcgaagtcgagcgttatgtcggtggtggtttaaaccagtttaccgatgcg
attggcgtgcgtttaaagaacccagaagtgacagttaacctcgaaatcgagggcgataaa
ctgtatatggtgactaagcgtatcgaaggcttaggcggcttcccaatggcgacacaggaa
gatgtgttgtctttgatttcgggcggttttgactcaggcgtgtcgagctaccaatttatt
aagaagggcgctcgtacccattactgtttcttcaacctcggcggtgcgcagcatgaaatt
ggcgtgaaacaagtcgcttaccatttgtggaaaacctatggtgaatcccacaaggtgaag
tttgtatctgtgccgttcgagcctgtggtggccgagattttagagaaaatcgacaacggt
caaatgggcgtggtgctcaagcgtatgatgatgcgcaccgcggcgcgtattgccgagcgt
atgggcattcaggcgattgtgacaggtgagagtttaggccaagtatcgagccaaacttta
accaatttaaacgtcattgaccgctgcaccgatatgctgatcctgcgcccgctgatcgcc
atggacaagcaggacatcatcaacgaatgtcgccgtatcggtaccgaagattttgctaaa
tctatgcctgaatattgcggcgtgatttcgcaaaagccaaccgtgaaggcggtactggcc
aaggttgaggccgaggagactaaattctctgaggacttgattgaccgtatcgttgagcag
gccgtggtcattgatatcagggagatagcagaacaaatgaatacgcgtatcactgaaact
gaaaccgttgttgctatcgacaccaatgaagtggtgattgatattcgcgccccagaggaa
gaagagaacaagccgctagagattgaaggcgtggaaatcaagcgcattcctttcttcaaa
ttagcgactcagtttgccgatctcgataagcagaagacttacctgttgtactgtgagcgt
ggtgtgatgagtaaattacaggcgctatacctgattgagcaaggttatcataatgttaag
gtctaccgcccttaa
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