Shewanella sp. JNE2: MZ182_02670
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Entry
MZ182_02670 CDS
T08546
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shej03009
]
MZ182_02670 (rimO)
Enzymes [BR:
shej01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MZ182_02670 (rimO)
Ribosome biogenesis [BR:
shej03009
]
Prokaryotic type
ribosomal protein modification factors
MZ182_02670 (rimO)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Methyltransf_2
UPF0180
CLP1_P
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UPO31766
UniProt:
A0A9Q8S7T4
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Position
complement(577364..578782)
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AA seq
472 aa
AA seq
DB search
MTVETFKPKQTTTLDTPAKTLEATSTNAVTTGNRIGFVSLGCPKNLVDSERILTQLRIDG
YEVTNSYDNADLVIVNTCGFIDAAVEESLDAVREALEENGKVIVTGCLGAKENQIREVHP
DVLEITGPHSYEAVLKHVHKYVPKPEHNPFTSLIPQTGVKLTPKHYAYLKISEGCDNRCT
FCIIPSLRGDLDSRPAGSILDEAKRLVESGVQEILVVSQDTSAYGKDKGGRTDFWDGMPV
KQDITSLARQLGKMGAWVRLHYIYPYPWVDDLIPLMAEGLILPYLDIPMQHASPRILKMM
KRPGRVDRQLEAIQRWREICPDLVIRSTFIVGFPGETEEDFQILLDFLKEARLDRVGCFK
YSEVDGAVANTIAELISEEVKEDRYHRFMEVQAEISAERLARFVGRTLDILIDDVDEEGA
IGRSFADAPEIDGMVFINGETELEPGMLVRARITHSDEHDLWAEVVDADTQD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgaaacgtttaaacccaagcaaacgaccacgcttgataccccagcaaaaaca
ttagaagcaacaagcactaatgctgtgaccactgggaatcgcatcggtttcgtgtctttg
ggctgcccaaaaaacctcgtggattcagagcgtattctgactcagttacgcatcgacggc
tacgaagtgactaacagctacgacaatgcagacttagttatcgtcaatacctgcggcttt
atcgatgctgcggtggaagaatctctggacgctgtacgtgaagccttagaagaaaacggc
aaagtgatcgtcactggctgccttggcgccaaagagaaccaaatccgcgaagtgcatcca
gatgtattagaaatcactggcccacacagctatgaagcggtgttaaagcacgttcacaaa
tacgtgcctaagccagagcacaaccctttcacctcgttaatcccacaaactggggttaag
ttaacgcctaagcattacgcttatttaaagatttcagaaggttgcgacaaccgttgtact
ttctgcattattccttcactacgtggcgatctcgacagccgcccagcgggcagcatccta
gatgaagctaagcgtttagtggaatcaggcgtacaagaaattttagtcgtcagccaagac
acctcggcctacggcaaagacaaaggcggtcgtaccgatttttgggacggcatgccagtc
aagcaagacattactagcctagcgcgccaactgggtaaaatgggcgcttgggtgcgtctg
cattacatctatccctacccatgggttgacgatttgatcccgctaatggccgaaggttta
atcctgccgtatttggatattccaatgcagcatgctagcccacgtatcctgaagatgatg
aagcgtccaggccgtgttgaccgtcagttagaagcgattcaacgctggcgtgaaatctgc
ccagatctagtgatccgctcgaccttcatcgtcggcttcccaggtgaaaccgaagaggat
ttccaaatcctgctcgatttcttaaaagaagctcgtcttgatcgcgtaggttgctttaag
tattctgaagtggatggcgctgtagccaacaccatcgctgagcttatcagcgaagaagtg
aaagaagacagataccacagatttatggaagtccaagccgagatcagcgccgagcgttta
gcccgtttcgttggccgcaccttagatattctgattgatgatgtagatgaagaaggcgcc
attggccgcagcttcgccgatgcacctgaaatcgacggcatggtgtttatcaatggtgaa
actgaacttgagcccggtatgttggttcgtgcccgcatcacccattcagatgaacacgat
ctgtgggccgaagtagtcgacgctgacactcaagattaa
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