Shewanella sp. WE21: CKQ84_16570
Help
Entry
CKQ84_16570 CDS
T05404
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shew03016
]
CKQ84_16570
Enzymes [BR:
shew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
CKQ84_16570
Transfer RNA biogenesis [BR:
shew03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CKQ84_16570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_9
Methyltransf_30
FAD_binding_2
Pyr_redox_2
NAD_binding_8
FAD_oxidored
PdeA_PAS
Motif
Other DBs
NCBI-ProteinID:
AVI67361
LinkDB
All DBs
Position
complement(3727928..3729970)
Genome browser
AA seq
680 aa
AA seq
DB search
MTAEPNKPCQIKRDYTQLINLYPATAHTDAHYLSKLSIYQQRVFEAHSQQKLLVLGQIGL
GNGLELLSWWRTQTNPNQRLLLNVFEPNPINAYELKLLWDQSASLTKVPELEPLAQRLLH
TEPTAIIGCQRLIFDDGRITIDLHFGDIQSQLCSLIHSPLHPVQHWLVLPHLQNGLNQQI
HWQMAKLSDDGATVATIGLNESSGLSETPASRFQACGFEVRDFTCAEIQTNPQPDAILLH
ERHVLRQQDAKAYAFNPMAAILPSDAPSSIAIIGGGLASAHLALSLAERGQSTQLFCKDT
KLGQGASGNRQGAIYPLMTPENDELSRFFQQAFLFSRRRVQALTSVPAPNQTPISHDFCG
VLQTAHDERSQLRLDKIIQSQNWPSEIAYRVDAQQANSLANINIDKSGFFYPLAGWVCPY
EYAEAALQKAQQLTEVKLHLETEILEIEHQSEGWYLITAKHRFGPFAQVVLANGAALTQF
DASNKLQISPFRGQVSHVPAQFQLSQLATVLCANGYLTPSHEGLHCLGASYVKEPKHLDF
CPQEQQENLAKMHESYPNQPWLEDIDMSGNNARVGVRMVTRDHFPMMGCAPDVLKILKDY
EQHQLTKESRHYWQTTPTPVHQGLYILGGLGSRGLSSGPLAAECLAAQLCGEPIPLDKAT
LCKLNPNRMWLRKLLKGKAL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
ttgactgcagagcccaataaaccttgccaaattaagcgcgattacacgcaattaatcaac
ctttatcccgcaacagctcacactgatgcacactatctcagcaagttgagcatttatcag
cagcgggtatttgaggctcattcacagcaaaaactcttagtattagggcaaataggttta
ggcaacgggcttgaactcttatcttggtggcgcactcagacaaatcctaaccaacgatta
ctccttaacgtattcgaacccaatccgattaatgcgtacgaacttaaattactttgggat
caatccgccagtttaaccaaagtgcctgaacttgagccacttgcccaacgcttacttcat
acagagccgacggctattataggttgtcagagattaatttttgatgacggtcgtatcaca
atcgacctgcactttggtgatattcaatcccagctctgttcactcatccattctccgctt
caccccgttcagcactggctggtattgccccatctacaaaatgggttaaatcagcagatc
cattggcagatggcaaaactcagtgacgatggcgccactgttgcaactattggattaaac
gaatcaagcggactaagcgaaacacctgcgagccgtttccaagcctgcggctttgaggtg
agggattttacctgcgcggaaatacagacaaaccctcagcctgatgccattttgttacac
gagcgccacgtcttacgccagcaagatgctaaagcctatgcctttaatcctatggctgca
atcttaccctcggacgcgcccagctcgattgccatcataggcggcgggttagcctcggcg
catttggcactgtctttggcggaacgcggccaaagtacgcagctcttttgtaaagatacc
aagcttggccaaggcgcctcgggcaatcgccaaggggcgatttatccgctgatgacacct
gaaaatgatgaattaagccgcttcttccagcaagcatttttatttagtcgacgtagagta
caggcgctgacatctgtccccgccccaaatcaaacgccgatttcccatgatttttgcggg
gtattgcaaactgcccacgatgaacgcagccaattacgactcgataaaattattcaaagc
cagaactggccaagtgaaattgcctatcgagtcgatgcgcagcaggctaattctcttgcg
aacattaatattgacaaatcaggctttttctatccgctggctggctgggtttgtccctac
gaatatgccgaagccgcactacaaaaagcgcagcagcttactgaggtcaaactccatttg
gagactgagatccttgaaattgagcatcaaagtgaaggttggtatttaatcaccgctaag
catcgctttggcccctttgcgcaagttgtgctcgccaatggcgcagcgctcacgcaattt
gatgccagcaacaaattacaaattagcccttttcgcggccaagtcagccatgtgcccgct
caatttcaattgagtcagctcgcgactgtactgtgcgccaacggttatttaaccccgagt
cacgaaggactccactgccttggcgcgagttacgttaaagaacctaagcatttagatttt
tgcccgcaggagcagcaagaaaacctcgccaaaatgcacgagagttatcccaatcagcct
tggcttgaagatatcgacatgagtggcaacaatgctcgcgttggcgtgcgtatggtcacg
cgggatcatttccctatgatgggctgcgcgcccgatgtgcttaaaatccttaaggattat
gagcaacatcagctcacgaaagaaagtcgtcactactggcaaaccacgccaacgccggtg
catcaagggctgtatattctcggagggttaggctcacgggggttaagttctgggccattg
gccgccgaatgtctcgcggcgcagctttgcggcgagccaataccactcgataaagcgact
ctgtgtaaactcaaccctaatcgtatgtggctgcgaaaattgctcaagggcaaagcgctc
tag
DBGET
integrated database retrieval system
