Shewanella sp. FDAARGOS_354: CEQ32_08510
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Entry
CEQ32_08510 CDS
T04944
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00730
Thiamine metabolism
shf01100
Metabolic pathways
shf01240
Biosynthesis of cofactors
shf04122
Sulfur relay system
Module
shf_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CEQ32_08510
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CEQ32_08510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shf03016
]
CEQ32_08510
Enzymes [BR:
shf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CEQ32_08510
Transfer RNA biogenesis [BR:
shf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CEQ32_08510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
DUF4621
Motif
Other DBs
NCBI-ProteinID:
ASF15030
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Position
complement(1887451..1888905)
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AA seq
484 aa
AA seq
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MKFIVKLYPEIMMKSKPVRMRFTKMLETNIRNVLKKVDEDAKVQRQWDRIWVKVPNDKPE
LAQAFGERLACIPGIAHVVQVDEYSFTSVDDIYQQVLPVYRDQIAGKTFCVRVKRTGNHD
FNSIEVERYVGGGLNQFTDAIGVRLKNPEVTVNLEIEGDKLYMVTKRIEGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVK
FVSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAERMGIQAIVTGESLGQVSSQTL
TNLNVIDRCTDMLILRPLITMDKQDIINECRRIGTEDFAKSMPEYCGVISQKPTVKAVLA
KVEAEETKFSEDLIDRIIEQAVAIDIREIAEQMNTRITETETVVAIDTNEVVIDIRAPEE
EENKPLEIEGVEIKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYHNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagctgtacccagaaatcatgatgaagagtaagcctgtgcgcatg
cgcttcactaaaatgcttgaaaccaacatccgtaacgtgctcaaaaaagttgatgaagat
gctaaagtgcaacgtcaatgggaccgtatttgggtaaaggtgccaaatgataaacctgaa
ttagctcaggcctttggtgagcgtttagcttgtatccctgggatcgcccacgtagtgcaa
gtggatgaatacagctttacgtcagttgatgatatctaccagcaagtattacccgtttat
cgcgaccaaattgccggcaaaaccttctgtgtacgtgtcaagcgcactggtaatcacgat
tttaactctattgaagtagagcgttatgtcggtggtggtttaaaccagtttaccgatgcg
attggcgtgcgcttaaagaaccccgaagtcactgttaacctcgaaatcgagggcgataaa
ctgtatatggtgactaagcgtatcgaaggcttaggcggtttcccaatggcaacgcaggaa
gatgtgttgtcgttaatttcgggcggttttgactcgggcgtatcgagttatcaatttatt
aagaagggcgctcgtacccattactgtttcttcaacctaggcggcgcgcagcacgagatt
ggcgttaagcaggttgcttaccatttgtggaaaacctatggtgaatcccacaaggtgaag
tttgtgtccgtgccgtttgagcctgtggtggccgagattttagagaaaatcgacaatggt
caaatgggcgtggtgctcaagcgtatgatgatgcgcaccgcggcacgtattgctgagcgt
atgggcattcaggcgattgtaacaggtgaaagcttgggtcaagtgtcgagccaaacctta
accaacttaaacgtgattgatcgttgcaccgatatgttgattttgcgtccgctgatcact
atggataagcaagatattatcaatgaatgccgccgtatcggcaccgaagattttgctaag
tctatgccggaatattgcggtgtgatttcacaaaagccgactgttaaagcggtactggct
aaggtggaagcggaagagacgaaattctctgaggatttgattgaccgtatcatagagcaa
gccgtggctattgatatccgggagatagcagaacaaatgaatacccgtatcactgaaact
gagaccgttgttgctatcgacaccaatgaagtggtgattgatattcgcgccccagaggaa
gaagagaataaaccgctggagattgaaggcgtggaaatcaagcgcattcctttcttcaaa
ttagcgactcagtttgccgatctcgataagcaaaagacttacctgctgtactgtgagcgt
ggcgtgatgagtaaattacaggcactttacctgattgagcaaggttatcacaatgttaag
gtttaccgcccttaa
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