KEGG   Shewanella sp. FDAARGOS_354: CEQ32_21770
Entry
CEQ32_21770       CDS       T04944                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
shf  Shewanella sp. FDAARGOS_354
Pathway
shf00740  Riboflavin metabolism
shf01100  Metabolic pathways
shf01110  Biosynthesis of secondary metabolites
shf01240  Biosynthesis of cofactors
shf02024  Quorum sensing
Module
shf_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:shf00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CEQ32_21770 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CEQ32_21770 (ribD)
Enzymes [BR:shf01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CEQ32_21770 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CEQ32_21770 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ASF17386
LinkDB
Position
4857663..4858808
AA seq 381 aa
MNWSELDNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHAL
RMAGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLR
DAGIQVDVGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDGKTALSNGVSKWITGPEA
RRDVQRLRLRACAIVTGIETVLADDPSLNVRYSGLGSLSSQLSEAQILQPLRVILDSRCR
MPIKAALLAIESPILLVSTEPYSPAFMAQLPAHVTCLQLPAIDGRISLPELLSYLGKSCN
QVLIEAGATLAGAFIGAGLADELVLYQAMKILGAQGRNLLELPDYQMMADIPTLKLVDER
KVGADTRFTLRLTSNPSLANK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaattggtcagaactcgataaccagatgatgagccgagccatacaactggctcgcaaa
ggattttataccactcgccccaatcccagtgtgggctgcgttatcgtaaaagataatcag
attgtcggtgaaggttatcatcaaaaagccggcgagccccacgccgaggtgcatgcactg
cgcatggctggcgagcttgcccgtggcgcgaccgcctatgtcaccttagagccttgcagc
cattatggtcgtacgccgccctgcgccttggcgttgatcaacataggtgtaaaacgtgtg
gtggtggcggttgaagatcccaatcctcaggtcggtggtcgcggtattcaaatgctgcgc
gatgcgggcattcaagtggatgtcggtttacatcgcgatgaggcctatgctttaaatctt
ggttttatgaagcgcatggagtcgggcctaccttgggtgacggtaaagcttgccgcgagt
ctcgatggtaaaaccgcattatccaatggtgtctctaagtggattacaggccccgaagct
cgccgcgatgtgcagcgtttacgtttgcgcgcctgcgccatagtaactgggattgaaacc
gtactggccgatgatccatccctcaatgtgcgctactcagggcttggcagtcttagctcg
caattgagtgaggcgcaaattttacaaccattgcgggtgattttagatagtcgctgccga
atgccgattaaggcagccttgcttgcgattgaatcgccgattttattagtctcaactgag
ccttactcaccagcctttatggcgcaattacccgcccatgtgacttgcctccaattaccg
gcgattgatggtcgaatctcgctacccgagctcttaagctatttaggcaaaagctgtaat
caggtgcttatcgaagcgggcgcgaccttagcaggtgcctttatcggcgcgggattagcc
gatgagttagtactgtatcaagcgatgaaaattcttggcgcacaaggacgtaatctactc
gaattacccgattatcaaatgatggccgatattccgaccctcaaactggtcgatgagcgt
aaagtgggcgcggatacgcgtttcaccttgcggctcacgtccaatccatctttagcgaat
aagtga

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